DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4s3 and cyp-13A8

DIOPT Version :9

Sequence 1:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_496115.1 Gene:cyp-13A8 / 188358 WormBaseID:WBGene00011674 Length:509 Species:Caenorhabditis elegans


Alignment Length:508 Identity:116/508 - (22%)
Similarity:210/508 - (41%) Gaps:79/508 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LPGPTIGELIANVKKGEIL-----------NWLKELREKHGPVFRIWFGKDLMVMFTDPEDIKQL 88
            ||||....:..  |.|.:|           .|.||    :|.::....|...:::.:||:.::::
 Worm    26 LPGPWGVPIFG--KAGAMLEDSFPPGYTLQKWTKE----YGKIYGFTEGMQKVMVISDPDLVQEI 84

  Fly    89 LGN--NQLLTKSRNYELLEPWLGKGLLTNG--GESWHRRRKLLTPGFHFRILSEFKEPMEENCRI 149
            |..  :....:..|....:|...|.:...|  |..|.|.|.:..|.|....:.:....||::.:.
 Worm    85 LVKQYDNFYGRKHNPVQGDPDKDKDIHIVGAQGFRWKRLRTITAPAFSNGSIKKVLTTMEDSTQE 149

  Fly   150 LVRRLRTKA-NGESFDIYPYITLFALDAICETAMGIKKHAQLQSDSEYVQ--AVQSICRVMHKQS 211
            |:::||.:: ||::.:::.:...:..|.|...|||       |.||:..:  .::.:........
 Worm   150 LMKKLREESENGKAVNMHLFYQEYTFDVISRVAMG-------QPDSQMFKNPLLKDVKGFFEHNR 207

  Fly   212 FSFWQRLNVF--------FKHTKPGKEREAALKVLHDETNRVIRLRREQLIQERNEWKPEAEQDD 268
            :..|.....|        :...|.||.......|:.......:..|..|...::.......|..|
 Worm   208 WQIWMFSGGFPFAVSFLKWLFIKVGKFGAGPFIVVQKSVTDAVMSRIAQREADKKHGVEPGEAAD 272

  Fly   269 VGAKRRLAFLDMLLLTQME-----------------GGAELSDTDIREEVDTFMFEGHDTTSSAI 316
                    ::||.|..:.|                 ...:|:..:|..:...|:..|.|||:.::
 Worm   273 --------YIDMFLNARAEVEHFGESNDEFHKSSSYNNRQLTTQEIISQCFVFLVAGFDTTAISL 329

  Fly   317 AFALSLLSKNPDVQQRAFEEA------SELEGREKESMPYLEAVIKETLRIYPSVPFF-SRKVLE 374
            ::....|:.||.:|.:..:|.      .|:...:...:.|::.||||:||::|...|. ||:.:.
 Worm   330 SYVTYFLALNPKIQSKLQDEVDKECPNDEITFDQLSKLKYMDNVIKESLRLFPFASFANSRRCMR 394

  Fly   375 DLEVGKLTVPKGASISCLIYMLHRDPKNF--PDPERFDPDRFLVNEKQMHP-FAFAAFSAGPRNC 436
            :..:|:..|..|..:....:.||.| ||.  .|.|.|.|:|:   :..:.| .|:.:|.||||.|
 Worm   395 NTVIGEQIVEAGVDVMIDTWTLHHD-KNVWGNDVEEFKPERW---DSPLTPQQAYLSFGAGPRVC 455

  Fly   437 IGQKFAMLELKTSLAMLLRSYRFLPD-KDHQPKPLAELVTKSGNGIRLRILPR 488
            :|.:||:||.|..|:.:|:.|.|..: |...|..|....|.....:.|.:.||
 Worm   456 LGMRFALLEQKGLLSHILKKYTFETNAKTQLPIKLVGRATARPENLFLSLKPR 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4s3NP_573003.2 p450 35..469 CDD:278495 111/487 (23%)
cyp-13A8NP_496115.1 p450 27..503 CDD:278495 112/500 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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