DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4s3 and cyp-13A6

DIOPT Version :10

Sequence 1:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_496113.1 Gene:cyp-13A6 / 188357 WormBaseID:WBGene00011673 Length:518 Species:Caenorhabditis elegans


Alignment Length:570 Identity:130/570 - (22%)
Similarity:223/570 - (39%) Gaps:139/570 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTLALVAFV----LWAAFLRYLPKILNFLRLQRFAKTLPGPT----IGELIANVKKG-----EI 52
            :|.:.|..|.    :|:.|:|               |.:.||.    ||.||..:...     :.
 Worm     6 LSAVLLGVFTYSVWIWSYFIR---------------KGIKGPRGFPGIGMLIQTIDHENPPFLKY 55

  Fly    53 LNWLKELREKHGPVFRIWFGKDLMVMFTDPEDIKQLLGNNQLLTKS-RNY--ELLEPWLGK---- 110
            .:|.|:    :|||:....|....::.::||.:      |::..|. .|:  ..|.|.:|.    
 Worm    56 RDWTKQ----YGPVYGFTEGPQQTMIISEPEMV------NEIFKKQFDNFYGRKLRPIIGDPEKD 110

  Fly   111 ---GLLTNGGESWHRRRKLLTPGFHFRILSEFKEPMEENCRILVRRLRTKA-NGESFDIYPYITL 171
               .:.:..|:.|.|.|.|.:|.|....|.:.:..::|....::..:..|. ..|..|:......
 Worm   111 KRVNIFSTQGKRWKRLRTLSSPSFSNNSLRKVRNSVQECGTEILWNIEQKVRKNEDIDMLIVYQE 175

  Fly   172 FALDAICETAMGIKKHAQLQSDSEY--------VQAV-----------------QSICRVMHKQ- 210
            :.|..|...|:|       ||:|..        |||:                 ..:.|.|.|. 
 Worm   176 YTLGVISRIALG-------QSESNMFKNPLLPKVQAIFNGSWHVFLITGIFPPLAGVFRKMSKML 233

  Fly   211 SFSFWQRLNVFFKHTKPGKEREAALKVLHDETNRVIRLRREQLIQERNEWKPEAEQDDVGAKRRL 275
            ..||.....:|                  |.....::.|.:|..::..:.....|..|       
 Worm   234 PASFIPAFKIF------------------DLIEVAVQARIDQRAKDEIKGVEPGEPQD------- 273

  Fly   276 AFLDMLL------LTQMEGGA--------------ELSDTDIREEVDTFMFEGHDTTSSAIAFAL 320
             |:|:.|      :..:.|.|              ||:..:|..:...|:..|.|||:.::::|.
 Worm   274 -FIDLFLDARVPDVKILSGEANEDFAKSSVVKINKELTFDEIIAQCFVFLAAGFDTTALSLSYAT 337

  Fly   321 SLLSKNPDVQQRAFEEAS------ELEGREKESMPYLEAVIKETLRIYP-SVPFFSRKVLEDLEV 378
            .||:.:|::|.:..||..      |:.......:.|||.|:|||||:|| .....:||.:.:..:
 Worm   338 YLLATHPEIQTKLQEEVDRECPDPEIFFDHLSKLKYLECVMKETLRLYPLGTTANTRKCMRETTI 402

  Fly   379 GKLTVPKGASISCLIYMLHRDPKNF-PDPERFDPDRFL--VNEKQMHPFAFAAFSAGPRNCIGQK 440
            ..:...:|.:|....:.||.:|:.: .|.|.|.|:|:.  ..|...|..::..|.:|||.|||.:
 Worm   403 NGVNFDEGMNIQVDTWTLHHNPRIWGEDVEDFKPERWENGACEHLEHNGSYIPFGSGPRQCIGMR 467

  Fly   441 FAMLELKTSLAMLLRSYRFLPDKDHQ-PKPLAELVTKSGNGIRLRILPRD 489
            .|.:|.|..||.:|:.|.|...|:.| |..|...:|.|...:.:::.|||
 Worm   468 LAQMEQKILLAQILKEYSFRTTKNTQIPVKLVGKLTLSPESVIVKLEPRD 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4s3NP_573003.2 CYP4 64..483 CDD:410721 112/486 (23%)
cyp-13A6NP_496113.1 CYP3A-like 61..511 CDD:410678 112/492 (23%)

Return to query results.
Submit another query.