DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4s3 and cyp-13A11

DIOPT Version :9

Sequence 1:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_499704.1 Gene:cyp-13A11 / 184472 WormBaseID:WBGene00008809 Length:517 Species:Caenorhabditis elegans


Alignment Length:493 Identity:118/493 - (23%)
Similarity:202/493 - (40%) Gaps:88/493 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 LKELREKHGPVFRIWFGKDLMVMFTDPEDIKQLLGNNQLLTKSRNYELLEPWLGK-------GLL 113
            ||:...::|.|:.|..|....::.:|...|.::..........||   |.|..|.       .|.
 Worm    56 LKKWTSQYGKVYGITEGLLRTLVISDTNLIHEVFVKQYDNFYGRN---LNPIQGDPNREKRVTLF 117

  Fly   114 TNGGESWHRRRKLLTPGFHFRILSEFKEPMEENCRILVRRL-RTKANGESFDIYPYITLFALDAI 177
            :..|..|.|.|.:..|.|....|.:.:..:|::...|:|.: :..|.|::.|:..|...|.:|.|
 Worm   118 SAQGHRWKRLRTIANPTFSSNNLRKIQVTVEDSALELLRHIEQHTAGGKAIDVLEYFQEFTMDVI 182

  Fly   178 CETAMGIKKHAQLQSDSEYVQAVQSICR-----------------------VMHKQSFSFWQRLN 219
            ...|||       |.||...:.....|.                       ::.|..|.|   .|
 Worm   183 GRIAMG-------QPDSLMFKNPLLPCARDVFGKPRTALFLSGILFPWIGPMIRKVVFYF---TN 237

  Fly   220 VFFKHTKPGKEREAALKVLHDETNRVIRLRREQLIQERNEWKPEAEQDDVGAKRRLAFLDMLLLT 284
            ||         ...|.::::...|.|.:..::::.:|:....|...||         |:|:.|..
 Worm   238 VF---------NNPAAQIMYQTANAVEQRIKQRMAEEKAGIDPGEPQD---------FIDLFLDA 284

  Fly   285 QME------------GGAELSDTDIREEV----DTFMFEGHDTTSSAIAFALSLLSKNPDVQQRA 333
            :.:            .|.:::....::||    ..|:..|.|||:.:::::..||:.:|..|::.
 Worm   285 KSDDMELENNEDFTKAGVKVTRQLTKDEVVGQCFVFLIAGFDTTALSLSYSSFLLATHPKAQKKL 349

  Fly   334 FEEAS------ELEGREKESMPYLEAVIKETLRIYP-SVPFFSRKVLEDLEVGKLTVPKGASISC 391
            .||..      |:...:...:.|:|.|||||||:|| .....||:.:...::|...:.||..|.|
 Worm   350 QEEIDRECADPEVTFDQLSKLKYMECVIKETLRMYPLGALANSRRCMRSTKIGNYEIEKGVDILC 414

  Fly   392 LIYMLHRDPKNF-PDPERFDPDRFLVNEKQMH-PFAFAAFSAGPRNCIGQKFAMLELKTSLAMLL 454
            ..:.||.|...: .|.|.|.|:|:...::..: ...:..|..|||.|||.:.|.:|.|..|:.:|
 Worm   415 DTWTLHYDKSIWGEDAEEFKPERWESGDEHFYQKGGYIPFGLGPRQCIGMRLAYMEEKLLLSHIL 479

  Fly   455 RSYRF-LPDKDHQPKPLAELVTKSGNGIRLRILPRDEN 491
            |.|.. :.:|...|..|....|.....:.|.:.|||:|
 Worm   480 RKYTLEVCNKTQIPLKLIGSRTTQPESVWLNLTPRDDN 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4s3NP_573003.2 p450 35..469 CDD:278495 111/469 (24%)
cyp-13A11NP_499704.1 p450 31..506 CDD:278495 113/480 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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