DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4s3 and cyp-33C2

DIOPT Version :10

Sequence 1:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_503594.1 Gene:cyp-33C2 / 178695 WormBaseID:WBGene00016697 Length:495 Species:Caenorhabditis elegans


Alignment Length:491 Identity:121/491 - (24%)
Similarity:198/491 - (40%) Gaps:74/491 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 PGPTIGEL--IANVKKG--EILNWLKELREKHGPVFRIWFGKDLMVMFTDPEDIKQ-LLGNNQLL 95
            |.|..|.|  |||...|  ....|.|    |:|.::..|.|....:|....:.||: .:.:.:..
 Worm    31 PLPVFGNLLSIANPPPGYEAFERWTK----KYGDIYTFWIGNTPHIMINTWDKIKETYIRDAETY 91

  Fly    96 TKSRNYELLEPWLG--KGLLTNGGESW--HRRRKLLTPGFHFRILSEF---KEPMEENCRILVR- 152
            |.......|:.:.|  .|::.:.|.:|  |||..|.|       :.:|   |..|:||..:.|: 
 Worm    92 TNKVRLPALDLFRGGEYGIIDSNGATWREHRRFALST-------MRDFGLGKNLMQENILMEVQD 149

  Fly   153 ---RLRTKANGESFDIYPYITLFALDAICETAMGIK----KHAQLQSDSEYVQAVQSICRVMH-- 208
               ||..|...|: ||.........:.:.:...|.:    |.::.|.....::|...:....|  
 Worm   150 VFARLDAKLGSET-DIPEVFDHAVANVVNQLLFGYRFVGPKESEYQELKRIIEAPTDLFGKPHMF 213

  Fly   209 -KQSFSFWQRLNVFFKHTKPGKE-REAALKVLHDETNRVIRLRREQLIQERNEWKPEAEQDDVGA 271
             ..:.....:|...|.:..|.|: |:.|....    |:.|...|:::  :.|:...|:..     
 Worm   214 LAMNIPVIAKLMPEFMYEGPFKDFRDTAFAFF----NKQIEAHRQEV--DLNDLNSESTD----- 267

  Fly   272 KRRLAFLDMLLLTQ----MEGGAE-LSDTDIREEVDTFMFEGHDTTSSAIAFALSLLSKNPDVQQ 331
                 |::..|..|    .||.:| .|:..:........|.|.:||::.|.:|:|.:..:|:||.
 Worm   268 -----FVETFLKEQKRRESEGDSETFSNVQLSNVCMDLWFAGLNTTTNTITWAISYILHHPEVQD 327

  Fly   332 RAFEEASELEG-------REKESMPYLEAVIKETLRIYPSVPF-FSRKVLEDLEVGKLTVPKGAS 388
            :..||..::.|       .:|..:||..|.|.|..|....||. .......|..:....:|||..
 Worm   328 KVHEEMDKVIGSDRLITTADKNDLPYFNAFINEAQRGINIVPLNLQHATTRDTVINGFKIPKGTG 392

  Fly   389 ISCLIYMLHRDPKNFPDPERFDPDRFL-VNEKQMHPFAFAAFSAGPRNCIGQKFAMLELKTSLAM 452
            :...|..:..:.:.||||..|:||||: .:.|.......|.||.|.|:|.|:..|.:||...:|.
 Worm   393 VVAQISTVMNNEEVFPDPHTFNPDRFIDEHGKLKRVEELAPFSVGKRSCPGEGLARMELFLFIAN 457

  Fly   453 LLRSYRFLPDKDHQPKPLAELVTKSGNGIRLRILPR 488
            .|..|:..|.|:..|.     :.||...:   |.||
 Worm   458 FLNRYKIYPSKEGPPS-----MDKSNGAL---IAPR 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4s3NP_573003.2 CYP4 64..483 CDD:410721 107/452 (24%)
cyp-33C2NP_503594.1 CYP1_2-like 59..489 CDD:410710 110/459 (24%)

Return to query results.
Submit another query.