DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4s3 and cyp-25A2

DIOPT Version :9

Sequence 1:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_497776.2 Gene:cyp-25A2 / 175495 WormBaseID:WBGene00007964 Length:502 Species:Caenorhabditis elegans


Alignment Length:533 Identity:144/533 - (27%)
Similarity:242/533 - (45%) Gaps:98/533 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LALVAFVLWAAFLRYLPKILNFLRLQRFAKTLPGP--TIGELIANVKKGEIL------NWLKELR 60
            :.||:|:::..|.|.    ..|...::...|.|.|  .:|.|...|.:.|.|      .|..||.
 Worm    11 ILLVSFIIYILFARR----EQFKLREKIGLTGPEPHWFMGNLKQIVDRKEKLGYDDSNKWFNELH 71

  Fly    61 EKHGPVFRIWFGKDLMVMFTDPEDIKQ----------------LLGNNQLLTKSRNYELLEPWLG 109
            :::|..|.|:||..:.::.::.||||:                :..:|||     |..||:....
 Worm    72 KQYGETFGIYFGAQMNIVLSNEEDIKEVFIKNFSNFSDRIVPPIFDSNQL-----NQSLLQNTYA 131

  Fly   110 KGLLTNGGESWHRRRKLLTPGFHFRILSEFKEPMEENCRILVRRLRTKA-NGESFDIYPYITLFA 173
            .|        |...|..:.|.|....:...:|.:.....:.:..||.|| :|:.:|||.......
 Worm   132 TG--------WKHTRSAIAPIFSTGKMKAMQETIHSKVDLFLDILREKASSGQKWDIYEDFQGLT 188

  Fly   174 LDAICETAMGIKKHAQL-QSDSEYVQAVQSICRVMHKQS----FSF--------WQRLNVFFKHT 225
            ||.|.:.|..|..:.|. ::|..||.|.:.|..:..:.|    .||        |:.|   :|:|
 Worm   189 LDVIGKCAFAIDSNCQRDRNDVFYVNARKFIANIDIRHSKVIAASFILPELAPLWRAL---YKYT 250

  Fly   226 KPGKEREAALKVLHDETNRVIRLRREQLIQERNEWKPEAEQDDVGAKRRLAFLDMLLLTQMEGGA 290
            ...   :|.:.::...:|          :.||......::..|:        |.:||..:.:...
 Worm   251 PLA---DAEIPLVEGLSN----------VYERRRGGEGSDSVDL--------LKLLLNREDDKSK 294

  Fly   291 ELSDTDIREEVDTFMFEGHDTTSSAIAFALSLLSKNPDVQQRAFEEASELEGREK--------ES 347
            .::..::.|....|:..|::|||:|:.:...||||.|:|||:.:||.  :|.:|.        .:
 Worm   295 PMTKQEVIENCFAFLLAGYETTSTAMTYCSYLLSKYPNVQQKLYEEI--MEAKENGGLTYDSIHN 357

  Fly   348 MPYLEAVIKETLRIYPSV-PFFSRKVLEDLEVGKLTVPKGASISCLIYMLHRDPKNFPDPERFDP 411
            |.||:.|.|||||.||.| .|.:|:.|.|:.:.....|||:.::||.:.:|.:|:|:..||.|.|
 Worm   358 MKYLDYVYKETLRCYPPVIHFINRRCLADITIRGQFYPKGSVVTCLPHTVHLNPENWDSPEEFHP 422

  Fly   412 DRFLVNEKQMHPFAFAAFSAGPRNCIGQKFAMLELKTSLAMLLRSYRFLPDKDHQPKPLAELVTK 476
            :||...|::.....:..|..|||.|:|.:||.:|.||::..||.::..     .|.|..|:|:..
 Worm   423 ERFENWEEKSSSLKWIPFGVGPRYCVGMRFAEMEFKTTIVKLLDTFEL-----KQFKGEADLIPD 482

  Fly   477 SGNGIRLRILPRD 489
            . ||:.:|  |:|
 Worm   483 C-NGVIMR--PKD 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4s3NP_573003.2 p450 35..469 CDD:278495 129/480 (27%)
cyp-25A2NP_497776.2 p450 38..498 CDD:278495 137/502 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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