DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4s3 and Cyp3a62

DIOPT Version :9

Sequence 1:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_001019403.1 Gene:Cyp3a62 / 170509 RGDID:1595919 Length:497 Species:Rattus norvegicus


Alignment Length:517 Identity:143/517 - (27%)
Similarity:252/517 - (48%) Gaps:56/517 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTLALVAFVLWAAFLRYLPKILNFLRLQRFAKTLPGPTIGELIANVKKGEILNWLKELREKHGP 65
            :.|..|:|.:|...:|.......||.:| ..:...|.|.:|.::| .:.| ...:.:...:|:|.
  Rat     9 LETWMLLATILVLLYLYGTSTHGNFKKL-GISGPKPLPFVGNILA-YRHG-FWEFDRHCHKKYGD 70

  Fly    66 VFRIWFGKDLMVMFTDPEDIKQLLGNN--QLLTKSRNYELLEP--WLGKGLLTNGGESWHRRRKL 126
            ::..:.|:..::..|||:.||.:|...  ...|..|::   .|  .|.|.:..:..|.|.|.|.|
  Rat    71 IWGFYEGRQPILAITDPDIIKTVLVKECYSTFTNRRSF---GPAGILKKAITLSEDEEWKRLRTL 132

  Fly   127 LTPGFHFRILSEFKEPMEENCRILVRRLRTKA-NGESFDIYPYITLFALDAICETAMGIKKHAQL 190
            |:|.|....|.|....:.:...:||:.::.:| .|....:......:::|.|..|:.|:...:..
  Rat   133 LSPTFTSGKLKEMFPIINQYADLLVKNVKHEAEKGNPITMKDIFGAYSMDVITGTSFGVNVDSLN 197

  Fly   191 QSDSEYVQAVQSICRVMHKQSFSFWQRLNVF------FKHTKPGKEREAALKVLHDETNRVIRLR 249
            ...:.:||.|:.:.:      |:|   |:.|      |....|..| ...:.|...:..:..|..
  Rat   198 NPQNPFVQKVKKLLK------FNF---LDPFFLSVILFPFLTPVFE-AFDITVFPKDVMKFFRTS 252

  Fly   250 REQLIQERNEWKPEAEQDDVGAKRRLAFLDMLLLTQMEGGAE----LSDTDIREEVDTFMFEGHD 310
            .|::.:.|.:.|         .|:||.||.:::.:|..|..|    |:|.:|..:...|:|.|::
  Rat   253 VERMKENRMQEK---------VKQRLDFLQLMINSQSSGDKESHQGLTDVEIVAQSIFFIFAGYE 308

  Fly   311 TTSSAIAFALSLLSKNPDVQQRAFEEA-SELEGREKES------MPYLEAVIKETLRIYPSVPFF 368
            |||||::|||.||:.:||:|::..:|. :.|..:...:      |.||:.|:.||||::|.....
  Rat   309 TTSSALSFALYLLATHPDLQKKLQDEIDAALPNKAPVTYDVLVEMEYLDMVLNETLRLFPVGGRL 373

  Fly   369 SRKVLEDLEVGKLTVPKGASISCLIYMLHRDPKNFPDPERFDPDRF-LVNEKQMHPFAFAAFSAG 432
            .|...:|:|:..:.:|||..:....:.||:|||.:|:||.|.|:|| ..|:..::|:.:..|..|
  Rat   374 ERVCKKDVEINGVFIPKGTVVMVPTFALHKDPKCWPEPEEFCPERFRKKNQDSINPYIYLPFGNG 438

  Fly   433 PRNCIGQKFAMLELKTSLAMLLRSYRFLPDKDHQPKPLAELVTKSG-----NGIRLRILPRD 489
            ||||||.:||::.:|.:|..:|:::.|...|:.| .||.  :.|.|     ..|.||.:.||
  Rat   439 PRNCIGMRFALMNMKIALVRVLQNFSFGLCKETQ-IPLK--LRKKGFFQPEKPIILRAVSRD 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4s3NP_573003.2 p450 35..469 CDD:278495 126/456 (28%)
Cyp3a62NP_001019403.1 p450 39..491 CDD:278495 131/478 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.