DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4s3 and Cyp4a10

DIOPT Version :9

Sequence 1:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_034141.3 Gene:Cyp4a10 / 13117 MGIID:88611 Length:509 Species:Mus musculus


Alignment Length:509 Identity:183/509 - (35%)
Similarity:275/509 - (54%) Gaps:42/509 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTLALVAFVLWAAFLRYLPKILNF-LRLQRFAKT---LPGPTIGELIANVK-KGEILNWLKELR 60
            :|....||.||  ..|..|.|.:.| |..|...|.   .|.|.......:.| ||:     :||:
Mouse    15 LSGFLQVASVL--GLLLLLVKAVQFYLHRQWLLKAFQQFPSPPFHWFFGHEKFKGD-----QELQ 72

  Fly    61 E-----KHGP-VFRIWF-GKDLMVMFTDPEDIKQLLGNNQLLTKSRN-YELLEPWLGKGLLTNGG 117
            |     ::.| .|..|| |....:...||:.:|.:||.:.  .|:.. |.||.||:|.|||...|
Mouse    73 EIVSCIENFPSAFPRWFWGSKAYLTVYDPDYMKVILGRSD--PKANGAYRLLAPWIGYGLLLLNG 135

  Fly   118 ESWHRRRKLLTPGFHFRILSEFKEPMEENCRILVRRLRTKANGE-SFDIYPYITLFALDAICETA 181
            :.|.:.|::|||.||:.||..:.:.|.::.|:::.:....|:.: |.:|:.:|:|..||.:.:.|
Mouse   136 QPWFQHRRMLTPAFHYDILKPYVKNMADSIRLMLDKWERLADQDSSIEIFQHISLMTLDTVMKCA 200

  Fly   182 MGIKKHAQLQSD-SEYVQAVQSICRVMHKQSFSFWQRLNVFFKHTKPGKEREAALKVLHDETNRV 245
            ...|...|:..: ..|:||:..:..:.|.:..:.:.:.:..:|.:..|:..:.|.::.||.|:.|
Mouse   201 FSHKGSVQVDGNYRTYLQAIGDLNNLFHSRVRNIFHQNDTIYKLSSNGRLAKQACQLAHDHTDGV 265

  Fly   246 IRLRREQLIQERNEWKPEAEQDDVGAKRRLAFLDMLLLTQMEGGAELSDTDIREEVDTFMFEGHD 310
            |:||::||       :.|.|.:.:..||||.|||:||..:||.|..:||.|:|.|||||||||||
Mouse   266 IKLRKDQL-------QDEGELEKIKKKRRLDFLDILLFARMENGDSMSDKDLRAEVDTFMFEGHD 323

  Fly   311 TTSSAIAFALSLLSKNPDVQQRAFEEASELEG-------REKESMPYLEAVIKETLRIYPSVPFF 368
            ||:|.:::....|:.:||.|||..||...|.|       ...:.:||....|||.||:||.||..
Mouse   324 TTASGVSWIFYALATHPDHQQRCREEVQSLLGDGSSITWDHLDQIPYTTMCIKEALRLYPPVPGI 388

  Fly   369 SRKVLEDLEV--GKLTVPKGASISCLIYMLHRDPKNFPDPERFDPDRFLVNEKQMHPFAFAAFSA 431
            .|::...:..  |: ::|||..::..||.||.:||.:|:||.|||.|| ..:...|..:|..||.
Mouse   389 VRELSTSVTFPDGR-SLPKGVQVTLSIYGLHHNPKVWPNPEVFDPSRF-APDSPRHSHSFLPFSG 451

  Fly   432 GPRNCIGQKFAMLELKTSLAMLLRSYRFLPDKDHQPKPLAELVTKSGNGIRLRI 485
            |.|||||::|||.|||..:|:.|..:..|||....|.|||.||.||.|||.|.:
Mouse   452 GARNCIGKQFAMSELKVIVALTLLRFELLPDPTRVPMPLARLVLKSKNGIYLHL 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4s3NP_573003.2 p450 35..469 CDD:278495 160/453 (35%)
Cyp4a10NP_034141.3 p450 52..503 CDD:278495 170/466 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167844982
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.640

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