DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4s3 and Cyp46a1

DIOPT Version :9

Sequence 1:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_034140.1 Gene:Cyp46a1 / 13116 MGIID:1341877 Length:500 Species:Mus musculus


Alignment Length:494 Identity:135/494 - (27%)
Similarity:222/494 - (44%) Gaps:70/494 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTLALVAFVLWAAFLRYLPKILNFLRLQRFAKTLPGP-----TIGELIANVKKGE--------- 51
            :.:..|:||.|...|:.         |.:...:.:|||     .:|.|....||.|         
Mouse     8 LGSAVLLAFGLCCTFVH---------RARSRYEHIPGPPRPSFLLGHLPYFWKKDEDCGRVLQDV 63

  Fly    52 ILNWLKELREKHGPVFRIWFGKDLMVMFTDPEDIKQLLGNNQLLTKSRNYELLEPWLGKGLLTNG 116
            .|:|.|    |:|||.|:.......|:.|.||.:|:.|.:.:....|:.|..|:...|:.|...|
Mouse    64 FLDWAK----KYGPVVRVNVFYKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGERLFGQG 124

  Fly   117 GES------WHRRRKLLTPGFHFRILSEFKEPMEENCRILVRRLRTKANGES-FDIYPYITLFAL 174
            ..|      |:::||::...|....|....|...|....||..|..||:|:: ..:...:|...:
Mouse   125 LVSECDYGRWYKQRKVMDLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTCATI 189

  Fly   175 DAICETAMGIKKHAQLQSDSEYVQAVQSICRVMHKQSFSFWQRLNVFFKHTKPGKEREAALKVLH 239
            |.:.:.|.|::....|.:.....|||    :||.:...:....|..|.    |||.::  |:.:.
Mouse   190 DILAKAAFGMETSMLLGAQKPLSQAV----KVMLEGISASRNTLAKFM----PGKRKQ--LREIR 244

  Fly   240 DETNRVIRLRREQLIQERNEWKPEAEQDDVGAKRRLAFLDMLLLTQM---EGGAELSDTDIREEV 301
             |:.|::|...:..:|.|.|.....|  |:.|.         :|||:   |.||: .|..:.:..
Mouse   245 -ESIRLLRQVGKDWVQRRREALKRGE--DMPAD---------ILTQILKAEEGAQ-DDEVLLDNF 296

  Fly   302 DTFMFEGHDTTSSAIAFALSLLSKNPDVQQRAFEEASELEGREKE-------SMPYLEAVIKETL 359
            .||...||:|:::.:||.:..||:.|::..|...|..|:.|.::.       .:.||..|:||:|
Mouse   297 VTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVVGSKRHLDYEDLGRLQYLSQVLKESL 361

  Fly   360 RIYPSVPFFSRKVLEDLEVGKLTVPKGASISCLIYMLHRDPKNFPDPERFDPDRFLVNEKQMHPF 424
            |:||......|.:.|:..:..:.||....:....|::.|....|.||..|:||||.....:.. |
Mouse   362 RLYPPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAPKPR-F 425

  Fly   425 AFAAFSAGPRNCIGQKFAMLELKTSLAMLLR--SYRFLP 461
            .:..||.|.|:||||:||.:|:|..:|.||:  .:|.:|
Mouse   426 TYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRIEFRLVP 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4s3NP_573003.2 p450 35..469 CDD:278495 129/460 (28%)
Cyp46a1NP_034140.1 p450 34..466 CDD:278495 129/459 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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