DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4s3 and Cyp4v3

DIOPT Version :10

Sequence 1:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_598730.1 Gene:Cyp4v3 / 102294 MGIID:2142763 Length:525 Species:Mus musculus


Alignment Length:521 Identity:206/521 - (39%)
Similarity:301/521 - (57%) Gaps:50/521 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VLWAA-----------FLRYLPKILNFLRLQRFAKTLPG-----PTIGELIANVKKG-----EIL 53
            :||.|           .:...|.::::.|..:..:::|.     |.:|..:......     :::
Mouse    14 LLWGAASAVSLAGATILISIFPMLVSYARKWQQMRSIPSVARAYPLVGHALYMKPNNAEFFQQLI 78

  Fly    54 NWLKELREKHGPVFRIWFGKDLMVMFTDPEDIKQLLGNNQLLTKSRNYELLEPWLGKGLLTNGGE 118
            .:.:|.|  |.|:.::|.|...:|.....|:::.:|.:::.:.||..|:.|:||||.||||:.|.
Mouse    79 YYTEEFR--HLPIIKLWIGPVPLVALYKAENVEVILTSSKQIDKSFLYKFLQPWLGLGLLTSTGS 141

  Fly   119 SWHRRRKLLTPGFHFRILSEFKEPMEENCRILVRRLRTKANGESFDIYPYITLFALDAICETAMG 183
            .|..|||:|||.|||.||..|.:.|.|...|||.:|....|.|:|:.:.||||.|||.|||||||
Mouse   142 KWRTRRKMLTPTFHFTILENFLDVMNEQANILVNKLEKHVNQEAFNCFFYITLCALDIICETAMG 206

  Fly   184 IKKHAQLQSDSEYVQAVQSICRVMHKQSFSFWQRLNVFFKHTKPGKEREAALKVLHDETNRVIRL 248
            ....||..:|||||:.|..:..:::::....|...::::...|.|::.:..||.||..||.||..
Mouse   207 KNIGAQSNNDSEYVRTVYRMSDMIYRRMKMPWLWFDLWYLVFKEGRDHKRGLKCLHTFTNNVIAE 271

  Fly   249 RREQLIQERNEWKPEAEQDDVGAKR--------RLAFLDMLLLTQMEGGAELSDTDIREEVDTFM 305
            |    ::||     :||:|..||.|        |.||||:||....|.|..||..||||||||||
Mouse   272 R----VKER-----KAEEDWTGAGRGPIPSKNKRKAFLDLLLSVTDEEGNRLSQEDIREEVDTFM 327

  Fly   306 FEGHDTTSSAIAFALSLLSKNPDVQQRAFEEASELEGR--------EKESMPYLEAVIKETLRIY 362
            |||||||::||.::|.||..||:||::..:|..|:.||        :.:.:.||:.|||||||::
Mouse   328 FEGHDTTAAAINWSLYLLGTNPEVQRKVDQELDEVFGRSHRPVTLEDLKKLKYLDCVIKETLRVF 392

  Fly   363 PSVPFFSRKVLEDLEVGKLTVPKGASISCLIYMLHRDPKNFPDPERFDPDRFL-VNEKQMHPFAF 426
            ||||.|:|.:.||.|||...|.||.....:.|.|||||:.|||||.|.|:||. .|.:..||:|:
Mouse   393 PSVPLFARSLSEDCEVGGYKVTKGTEAIIIPYALHRDPRYFPDPEEFRPERFFPENSQGRHPYAY 457

  Fly   427 AAFSAGPRNCIGQKFAMLELKTSLAMLLRSYRFLPDKDHQPKPLA-ELVTKSGNGIRLRILPRDE 490
            ..||||||||||||||::|.||.||.:||.:....::..:...|| :|:.:..|||.:::..|.|
Mouse   458 VPFSAGPRNCIGQKFAVMEEKTILACILRQFWVESNQKREELGLAGDLILRPNNGIWIKLKRRHE 522

  Fly   491 N 491
            :
Mouse   523 D 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4s3NP_573003.2 CYP4 64..483 CDD:410721 193/436 (44%)
Cyp4v3NP_598730.1 CYP4V 76..515 CDD:410773 196/449 (44%)

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