DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4s3 and Cyp4v3

DIOPT Version :9

Sequence 1:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_598730.1 Gene:Cyp4v3 / 102294 MGIID:2142763 Length:525 Species:Mus musculus


Alignment Length:521 Identity:206/521 - (39%)
Similarity:301/521 - (57%) Gaps:50/521 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VLWAA-----------FLRYLPKILNFLRLQRFAKTLPG-----PTIGELIANVKKG-----EIL 53
            :||.|           .:...|.::::.|..:..:::|.     |.:|..:......     :::
Mouse    14 LLWGAASAVSLAGATILISIFPMLVSYARKWQQMRSIPSVARAYPLVGHALYMKPNNAEFFQQLI 78

  Fly    54 NWLKELREKHGPVFRIWFGKDLMVMFTDPEDIKQLLGNNQLLTKSRNYELLEPWLGKGLLTNGGE 118
            .:.:|.|  |.|:.::|.|...:|.....|:::.:|.:::.:.||..|:.|:||||.||||:.|.
Mouse    79 YYTEEFR--HLPIIKLWIGPVPLVALYKAENVEVILTSSKQIDKSFLYKFLQPWLGLGLLTSTGS 141

  Fly   119 SWHRRRKLLTPGFHFRILSEFKEPMEENCRILVRRLRTKANGESFDIYPYITLFALDAICETAMG 183
            .|..|||:|||.|||.||..|.:.|.|...|||.:|....|.|:|:.:.||||.|||.|||||||
Mouse   142 KWRTRRKMLTPTFHFTILENFLDVMNEQANILVNKLEKHVNQEAFNCFFYITLCALDIICETAMG 206

  Fly   184 IKKHAQLQSDSEYVQAVQSICRVMHKQSFSFWQRLNVFFKHTKPGKEREAALKVLHDETNRVIRL 248
            ....||..:|||||:.|..:..:::::....|...::::...|.|::.:..||.||..||.||..
Mouse   207 KNIGAQSNNDSEYVRTVYRMSDMIYRRMKMPWLWFDLWYLVFKEGRDHKRGLKCLHTFTNNVIAE 271

  Fly   249 RREQLIQERNEWKPEAEQDDVGAKR--------RLAFLDMLLLTQMEGGAELSDTDIREEVDTFM 305
            |    ::||     :||:|..||.|        |.||||:||....|.|..||..||||||||||
Mouse   272 R----VKER-----KAEEDWTGAGRGPIPSKNKRKAFLDLLLSVTDEEGNRLSQEDIREEVDTFM 327

  Fly   306 FEGHDTTSSAIAFALSLLSKNPDVQQRAFEEASELEGR--------EKESMPYLEAVIKETLRIY 362
            |||||||::||.::|.||..||:||::..:|..|:.||        :.:.:.||:.|||||||::
Mouse   328 FEGHDTTAAAINWSLYLLGTNPEVQRKVDQELDEVFGRSHRPVTLEDLKKLKYLDCVIKETLRVF 392

  Fly   363 PSVPFFSRKVLEDLEVGKLTVPKGASISCLIYMLHRDPKNFPDPERFDPDRFL-VNEKQMHPFAF 426
            ||||.|:|.:.||.|||...|.||.....:.|.|||||:.|||||.|.|:||. .|.:..||:|:
Mouse   393 PSVPLFARSLSEDCEVGGYKVTKGTEAIIIPYALHRDPRYFPDPEEFRPERFFPENSQGRHPYAY 457

  Fly   427 AAFSAGPRNCIGQKFAMLELKTSLAMLLRSYRFLPDKDHQPKPLA-ELVTKSGNGIRLRILPRDE 490
            ..||||||||||||||::|.||.||.:||.:....::..:...|| :|:.:..|||.:::..|.|
Mouse   458 VPFSAGPRNCIGQKFAVMEEKTILACILRQFWVESNQKREELGLAGDLILRPNNGIWIKLKRRHE 522

  Fly   491 N 491
            :
Mouse   523 D 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4s3NP_573003.2 p450 35..469 CDD:278495 193/460 (42%)
Cyp4v3NP_598730.1 p450 51..517 CDD:278495 199/476 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167844921
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 1 1.100 - - O PTHR24291
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.750

Return to query results.
Submit another query.