DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4s3 and cyp26c1

DIOPT Version :9

Sequence 1:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster
Sequence 2:XP_031761583.1 Gene:cyp26c1 / 100489980 XenbaseID:XB-GENE-1219115 Length:608 Species:Xenopus tropicalis


Alignment Length:541 Identity:114/541 - (21%)
Similarity:195/541 - (36%) Gaps:180/541 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 GEILNWL-------KELREKHGPVFRIWFGKDLMVMFTDPEDIKQ-LLGNNQLLTKSRNYELLEP 106
            ||.|:||       ...|||:|.:|:.......::..|..|:|:: |||.:.|::..        
 Frog    60 GETLHWLVQGSSFHSSRREKYGNIFKTHLLGKPVIRVTGAENIRKILLGEHHLVSTQ-------- 116

  Fly   107 W-------LGKGLLTNG-GESWHRRRKLLTPGFHFRILSEFKEPMEENCRILVRRLRTKANGESF 163
            |       ||...|:|. ||...::||:::.......|..:...:.|..|   ..:|:...|   
 Frog   117 WPQSTQIILGSNTLSNSIGELHRQKRKMMSKVLSSAALESYLPRIHEAVR---WEVRSWCRG--- 175

  Fly   164 DIYPYITLFALDAICETAMGIKKHAQL-----QSDSEYVQAVQSICRVMHKQSFSFWQRLNVFFK 223
             :.|...|     .|..|:..:..|::     .:|:::.:..::..:::..   .|...|::.|.
 Frog   176 -VGPVSML-----SCAKALTFRIAARILLGLSLTDTQFQELTRTFEQLVEN---LFCLPLDIPFS 231

  Fly   224 HTKPGKEREAALKVLHDETNRVIRLRREQLIQER-NEWKPEAEQDDVGAKRRLAFLDMLLLTQME 287
            ..:.|.:   |...||.        ..|:.|:|: ::..|:|.:|         .||.|:.:..|
 Frog   232 GLRKGMK---ARDTLHQ--------YMEEAIKEKLSKRDPDACED---------ALDYLINSAKE 276

  Fly   288 GGAELSDTDIREEVDTFMFEGHDTTSSAIAFALSLLSKNPDV-----QQRAFEEASE-------- 339
            ||.|::..:::|.....:|....||:||....:.||.|:|..     |:.|....||        
 Frog   277 GGKEINMQELKESAIELIFAAFLTTASASTSLVLLLLKHPSAIHKIRQELASHGLSEHCEQCLPA 341

  Fly   340 ----------------------------LEGREK------------------------------- 345
                                        .||:.|                               
 Frog   342 TENPNNNILQDNGHQCLTAGCQLPLVMGTEGQVKTLWEQTKQLLTDRTDQDPQNSLSSKNLVNGE 406

  Fly   346 ----------------------------------------ESMPYLEAVIKETLRIYPSVPFFSR 370
                                                    :|:.||:.|:||.||:.|.|....|
 Frog   407 NRIQEAPCSHDKSNCSPVPGKLQNSVFEGTCQQNISLEKLKSLHYLDCVVKEVLRLLPPVSGGYR 471

  Fly   371 KVLEDLEVGKLTVPKGASISCLIYMLHRDPKNFPDPERFDPDRFLV--NEKQMHPFAFAAFSAGP 433
            ..|:..|:....:|||.|:...|...|.....:.:.|.|||:||..  :|.::..|.:..|..|.
 Frog   472 TALQTFELDGYQIPKGWSVMYSIRDTHETAAVYQNAEMFDPERFSTERDEGKLGRFNYIPFGGGA 536

  Fly   434 RNCIGQKFAMLELKTSLAMLL 454
            |:|||::.|.:.||. |||.|
 Frog   537 RSCIGKELAQIILKI-LAMEL 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4s3NP_573003.2 p450 35..469 CDD:278495 114/541 (21%)
cyp26c1XP_031761583.1 cytochrome_P450 59..588 CDD:425388 114/541 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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