DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4s3 and cyp4b1

DIOPT Version :9

Sequence 1:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_001120073.1 Gene:cyp4b1 / 100145080 XenbaseID:XB-GENE-5924259 Length:510 Species:Xenopus tropicalis


Alignment Length:504 Identity:178/504 - (35%)
Similarity:270/504 - (53%) Gaps:42/504 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LALVAFVLWAAFLRYLPKILNFLRLQRFAKTLPGPTIGELIANV----KKGEILNWLKELREKHG 64
            |.|:|.:|.|..| ||.:    .|.:...|..|||....|:.||    :.|:.|:.|.....|:|
 Frog    23 LCLLAVLLKATQL-YLSQ----KRQENIFKQFPGPPRHWLLGNVDQIRRDGKDLDLLVNWTHKNG 82

  Fly    65 PVFRIWFGKDLMVMF-TDPEDIKQLLGNNQLLTKSRNYELLEPWLGKGLLTNGGESWHRRRKLLT 128
            ..|.:|||.....:| |.|:..|.:.|..: ...|.:|:.|.||:|||||...|..|.:.|:|||
 Frog    83 GAFPVWFGNFSSFLFLTHPDYAKVIFGREE-PKSSISYDFLVPWIGKGLLVLTGPKWFQHRRLLT 146

  Fly   129 PGFHFRIL-------SEFKEPMEENCRILVRRLRTKANGESFDIYPYITLFALDAICETAMGIKK 186
            ||||:.:|       |:....|.:|...|:.:.:|      .:::.:::|..||:|.:.|.....
 Frog   147 PGFHYDVLKPYVNLISKCTTDMLDNWEKLITKQKT------VELFQHLSLMTLDSIMKCAFSYDS 205

  Fly   187 HAQLQSDSEYVQAVQSICRVMHKQSFSFWQRLNVFFKHTKPGKEREAALKVLHDETNRVIRLRRE 251
            :.|..|::.|::||..:..|.:.:...|....:..|..:..|.....|.::.|:.|::||:.|:|
 Frog   206 NCQKDSNNAYIKAVFDLSYVANLRLRCFPYHNDTVFYLSPHGYRFRKACRITHEHTDKVIQQRKE 270

  Fly   252 QLIQERNEWKPEAEQDDVGAKRRLAFLDMLLLTQMEGGAELSDTDIREEVDTFMFEGHDTTSSAI 316
            .:       |.|.|.:.:..||.|.|||:||..:.|.|..|||.|:|.|||||||||||||:|.|
 Frog   271 SM-------KLEKELEKIQQKRHLDFLDILLFARDEKGHGLSDDDLRAEVDTFMFEGHDTTASGI 328

  Fly   317 AFALSLLSKNPDVQQRAFEEASE-------LEGREKESMPYLEAVIKETLRIYPSVPFFSRKVLE 374
            ::.|..::|.|:.||:..||..|       :|..:...:||....|||:||:||.||..:|::..
 Frog   329 SWILYCMAKYPEHQQKCREEIKEVLGDRQIMEWEDLGKIPYTNMCIKESLRMYPPVPGVARQLRN 393

  Fly   375 DLEV--GKLTVPKGASISCLIYMLHRDPKNFPDPERFDPDRFL-VNEKQMHPFAFAAFSAGPRNC 436
            .:..  |: :||.|..|...||.:|::|..:.|||.|:|.||. .|....|..||..|:||||||
 Frog   394 PVTFFDGR-SVPAGTLIGLSIYAIHKNPAVWEDPEVFNPLRFSPENSANRHSHAFLPFAAGPRNC 457

  Fly   437 IGQKFAMLELKTSLAMLLRSYRFLPDKDHQPKPLAELVTKSGNGIRLRI 485
            |||.|||.|:|.::|:.|..:...||.::.|..:.:||.||.|||.:.:
 Frog   458 IGQNFAMNEMKVAVALTLNRFHLAPDLENPPIKIPQLVLKSKNGIHVHL 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4s3NP_573003.2 p450 35..469 CDD:278495 161/455 (35%)
cyp4b1NP_001120073.1 p450 50..503 CDD:278495 167/467 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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