DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4s3 and cyp4b1

DIOPT Version :10

Sequence 1:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_001120073.1 Gene:cyp4b1 / 100145080 XenbaseID:XB-GENE-5924259 Length:510 Species:Xenopus tropicalis


Alignment Length:504 Identity:178/504 - (35%)
Similarity:270/504 - (53%) Gaps:42/504 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LALVAFVLWAAFLRYLPKILNFLRLQRFAKTLPGPTIGELIANV----KKGEILNWLKELREKHG 64
            |.|:|.:|.|..| ||.:    .|.:...|..|||....|:.||    :.|:.|:.|.....|:|
 Frog    23 LCLLAVLLKATQL-YLSQ----KRQENIFKQFPGPPRHWLLGNVDQIRRDGKDLDLLVNWTHKNG 82

  Fly    65 PVFRIWFGKDLMVMF-TDPEDIKQLLGNNQLLTKSRNYELLEPWLGKGLLTNGGESWHRRRKLLT 128
            ..|.:|||.....:| |.|:..|.:.|..: ...|.:|:.|.||:|||||...|..|.:.|:|||
 Frog    83 GAFPVWFGNFSSFLFLTHPDYAKVIFGREE-PKSSISYDFLVPWIGKGLLVLTGPKWFQHRRLLT 146

  Fly   129 PGFHFRIL-------SEFKEPMEENCRILVRRLRTKANGESFDIYPYITLFALDAICETAMGIKK 186
            ||||:.:|       |:....|.:|...|:.:.:|      .:::.:::|..||:|.:.|.....
 Frog   147 PGFHYDVLKPYVNLISKCTTDMLDNWEKLITKQKT------VELFQHLSLMTLDSIMKCAFSYDS 205

  Fly   187 HAQLQSDSEYVQAVQSICRVMHKQSFSFWQRLNVFFKHTKPGKEREAALKVLHDETNRVIRLRRE 251
            :.|..|::.|::||..:..|.:.:...|....:..|..:..|.....|.::.|:.|::||:.|:|
 Frog   206 NCQKDSNNAYIKAVFDLSYVANLRLRCFPYHNDTVFYLSPHGYRFRKACRITHEHTDKVIQQRKE 270

  Fly   252 QLIQERNEWKPEAEQDDVGAKRRLAFLDMLLLTQMEGGAELSDTDIREEVDTFMFEGHDTTSSAI 316
            .:       |.|.|.:.:..||.|.|||:||..:.|.|..|||.|:|.|||||||||||||:|.|
 Frog   271 SM-------KLEKELEKIQQKRHLDFLDILLFARDEKGHGLSDDDLRAEVDTFMFEGHDTTASGI 328

  Fly   317 AFALSLLSKNPDVQQRAFEEASE-------LEGREKESMPYLEAVIKETLRIYPSVPFFSRKVLE 374
            ::.|..::|.|:.||:..||..|       :|..:...:||....|||:||:||.||..:|::..
 Frog   329 SWILYCMAKYPEHQQKCREEIKEVLGDRQIMEWEDLGKIPYTNMCIKESLRMYPPVPGVARQLRN 393

  Fly   375 DLEV--GKLTVPKGASISCLIYMLHRDPKNFPDPERFDPDRFL-VNEKQMHPFAFAAFSAGPRNC 436
            .:..  |: :||.|..|...||.:|::|..:.|||.|:|.||. .|....|..||..|:||||||
 Frog   394 PVTFFDGR-SVPAGTLIGLSIYAIHKNPAVWEDPEVFNPLRFSPENSANRHSHAFLPFAAGPRNC 457

  Fly   437 IGQKFAMLELKTSLAMLLRSYRFLPDKDHQPKPLAELVTKSGNGIRLRI 485
            |||.|||.|:|.::|:.|..:...||.::.|..:.:||.||.|||.:.:
 Frog   458 IGQNFAMNEMKVAVALTLNRFHLAPDLENPPIKIPQLVLKSKNGIHVHL 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4s3NP_573003.2 CYP4 64..483 CDD:410721 158/436 (36%)
cyp4b1NP_001120073.1 CYP4B-like 71..505 CDD:410771 161/448 (36%)

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