Sequence 1: | NP_001259560.1 | Gene: | Rab3-GEF / 32442 | FlyBaseID: | FBgn0030613 | Length: | 2154 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038961933.1 | Gene: | Madd / 94193 | RGDID: | 619922 | Length: | 1647 | Species: | Rattus norvegicus |
Alignment Length: | 1930 | Identity: | 748/1930 - (38%) |
---|---|---|---|
Similarity: | 1010/1930 - (52%) | Gaps: | 433/1930 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 QQKASLCPRLVDYMAIVGAHTTPPMPKGLQGLKAPPVQVPDLLRRYPPSDHADFPLPLDMVYFCQ 68
Fly 69 PEGCTSVGPRRTGSAIRDMTSFVFALTDKDSGKTRYGICVNFYRPIER--PSSAAGSAGAGNDRP 131
Fly 132 GNGGPGGHGGGAGGGAGGGGRGGRRSSAFRRESWRKSMERSSDSAFSSDYRSNVAPSDSDRELTS 196
Fly 197 RRDSDQQRLHSHHSHHQPHHPSASPAVPKLGLMAPSADSESGGSHSP-SPRASRKRTKLRNQSLT 260
Fly 261 SLCIISHHPFFTTFRECLFILKKLIDACNESSSPKRVGASQKINRDNVWTVLTGH-VSDATPSIV 324
Fly 325 LHDVREIETWILRLLSTPVPVPGSTRVEVEVLSPTVHEPLLFALPDHTRFSLVDFPLHLPLELLG 389
Fly 390 VETCLKVWTLIMQENKVLFQSRDYNALSMSVMAFVTMLYPLEYMFPVIPLLPTCLSCAEQLLLAP 454
Fly 455 TPFVIGVPASFLVYKKNFRLPDDIWVVDLDSTKLTPPTGGYEEIPPLPEPEGTILKNHLKQAMLL 519
Fly 520 MDEAGLGALTSMTATNTAVSSQQLLPSVRDSLQEPPLLGVSQVRLPLQTPPHSAQASQRNSMSAQ 584
Fly 585 GTISSRQPSPMNSPALNPFVYGTDVDSVDVATRVAMVRFFNAQNTLANFAEHTRTLRLYPRPVVA 649
Fly 650 FQINSFLRSRPRASQFLNQFARTQAVEFLAEWSLTPTNVAFLRVQTGVMDPMQVGDKPKWFAHAL 714
Fly 715 TPIRFSVWDDGSSLNGALR--SLKQLECQPTDESGSDSEGADSSSSSYSSLSDFVSEMASSDLSP 777
Fly 778 SLHDVFGSYNRPHVVPQTLSSNLDPALVYHPPSKLQYPEGIADAVASKEEEDEERADS------- 835
Fly 836 PVSSSSSRSDLSSPSFNRDSEFDFQPKGGQTLGSTTVGSGAAAPSFELATPLAMRLEATIKMASI 900
Fly 901 EQESDTVSTATGKTIAAGSKLQRHPSDSESRPEKKIPPPLTPPVKQPGVSNILARTGSSGSSSSS 965
Fly 966 PGRQSSQSSLFE-NFASHAKELVRETTRQSSQEGLLAHVDKFTLHAKKAAGEASKQALEVSKQAA 1029
Fly 1030 GVSKNTLEDLTYVGKSTLGDLTKTAKEAATKKGIIKIEEHSAGGAGPPPKSPGSQLATHKQVQQS 1094
Fly 1095 GGQGGGNNFFSAIGTDFNGLASSTSTMFS----GMFGKKSQQKQVPVQQKQPNVSAGKAKSGIN- 1154
Fly 1155 -----FDPFPG-----RKGLV-ERTPLIKHSGPRQTQEELTRQQNQERSHSNAENQTFLKDVTNQ 1208
Fly 1209 VLAGEGVGWLKLNRFKKLMEDESYRTLVLSKLNKTLDKK-IAPDDHIDDVCVTKPVWKGMLKCIQ 1272
Fly 1273 AIAGGLDVTFANFGLGGMASVFQLMEVAHTHYWSKEINEGSDMSSSLLSSHAASPMGSRENL--- 1334
Fly 1335 ----------------RSPSSPNGSHSALGSE-------------WASPQESRKSST-------- 1362
Fly 1363 -----QLAHGGPGGSHSGAPINRRLSSA------DSQDGQSTTEMFKDMLSQKRSALKNMLTSFD 1416
Fly 1417 SDTTTSKDSKKS-----------SGNLWSGKSTLSAGFRYTG---------GHLINTSSSPSPD- 1460
Fly 1461 -------SPRVYLFEGLLGKD---------------------RLNLWNQMQFWEDAFLDAVSQER 1497
Fly 1498 DMIGMDQGPIEMMERYKSLSESERKRLEHDEDRLLSTMLYNLTAILVMLNVAKDEIRRKIRRLLG 1562
Fly 1563 KSHIGLVYSQEVHNVVDQINNLNGNDIDLKPLGSRLLHRQSFTVHQGTDVNGPLRFMEVRDDGLV 1627
Fly 1628 LRSVDGTIVERWWYERLVNMTYSPKTKLLCLWRRNGGQTQLHKYYTRKCKELYNCIKEAMERGGT 1692
Fly 1693 PTNV----PELGGEFPVQDMNTGEGGLLQVCLEGVGLLFSNS---KFFVRLDHIRKCFTQKGGIF 1750
Fly 1751 VLEEYNPKTRNLIQRKYQSSMSDQICYSVLCVFSYVAAGQDQKKN 1795 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rab3-GEF | NP_001259560.1 | uDENN | 10..111 | CDD:214824 | 59/100 (59%) |
DENN | 260..486 | CDD:214823 | 144/226 (64%) | ||
dDENN | 613..681 | CDD:129037 | 46/67 (69%) | ||
Madd | XP_038961933.1 | uDENN | 7..97 | CDD:214824 | 59/100 (59%) |
DENN | 172..401 | CDD:214823 | 145/228 (64%) | ||
dDENN | 485..553 | CDD:129037 | 46/67 (69%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166353853 | |
Domainoid | 1 | 1.000 | 763 | 1.000 | Domainoid score | I81 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3570 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H14249 | |
Inparanoid | 1 | 1.050 | 1175 | 1.000 | Inparanoid score | I188 |
OMA | 1 | 1.010 | - | - | QHG48534 | |
OrthoDB | 1 | 1.010 | - | - | D162625at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0006143 | |
OrthoInspector | 1 | 1.000 | - | - | oto97185 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_106194 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR13008 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X4435 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
13 | 12.900 |