Sequence 1: | NP_001259560.1 | Gene: | Rab3-GEF / 32442 | FlyBaseID: | FBgn0030613 | Length: | 2154 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012816822.1 | Gene: | madd / 780174 | XenbaseID: | XB-GENE-5787338 | Length: | 1662 | Species: | Xenopus tropicalis |
Alignment Length: | 1966 | Identity: | 731/1966 - (37%) |
---|---|---|---|
Similarity: | 1005/1966 - (51%) | Gaps: | 500/1966 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MSDQQKASLCPRLVDYMAIVGAHTTPPMPKGLQGLKAPPVQVPDLLRRYPPSDHADFPLPLDMVY 65
Fly 66 FCQPEGCTSVGPRRTGSAIRDMTSFVFALTDKDSGKTRYGICVNFYRPIE------------RPS 118
Fly 119 SAAGSAGAGNDRPGNGGPGGHGGGAGGGAGGGGRGGRRSSAFRRESWRKSMERSSDSAFSSDYRS 183
Fly 184 NVAPSDSDRELTSRRDSDQQRLHSHHSHHQPHHPSASPAVPKLGLMAPSADSESGGSHSP-SPRA 247
Fly 248 SRKRTKLRNQSLTSLCIISHHPFFTTFRECLFILKKLIDACNESSSPKRVGASQKINRDNVWTVL 312
Fly 313 TGHVS-DATPSIVLHDVREIETWILRLLSTPVPVPGSTRVEVEVLSPTVHE-PLLFALPDHTRFS 375
Fly 376 LVDFPLHLPLELLGVETCLKVWTLIMQENKVLFQSRDYNALSMSVMAFVTMLYPLEYMFPVIPLL 440
Fly 441 PTCLSCAEQLLLAPTPFVIGVPASFLVYKKNFRLPDDIWVVDLDSTKLTPPTGGYEEIPPLPEPE 505
Fly 506 GTILKNHLKQAMLLMDEAGLGALTSMTATNTAVSSQQLLPSVRDSLQEPPLLGVSQVRLPLQTPP 570
Fly 571 HSAQASQRNSMSAQGTISSRQPSPMNSPALNPFVYGTDVDSVDVATRVAMVRFFNAQNTLANFAE 635
Fly 636 HTRTLRLYPRPVVAFQINSFLRSRPRASQFLNQFARTQAVEFLAEWSLTPTNVAFLRVQTGVMDP 700
Fly 701 MQVGDKPKWFAHALTPIRFSVWDDGSSLNGA--LRSLKQLECQPTDESGSDSEGADSSSSSYSSL 763
Fly 764 SDFVSEMASSDLSPSLHDVFGSYNRPHVVPQTLSSNLDPALVYHPPSKLQYPEGIADAVASKEEE 828
Fly 829 DEERADSPVSSSSSRSDLSSPSFNRDSEFDFQPKGGQTLGSTTVGS-------GAAAPSFELATP 886
Fly 887 -----------LAMRLEATIKMASIEQESDTVSTATGKTIAAGSKLQRHPSDSESRPEKKIPP-- 938
Fly 939 ------------------------PLTPPVKQPGVSNILARTGSSGSS-SSSPGRQSSQSSLFEN 978
Fly 979 FASHAKELVRETTRQSSQEGLLAHVDKFTLHAKKAAGEASKQALEVSKQAAGVSKNTLEDLTYVG 1043
Fly 1044 KSTLGDLTKTAKEAATKKGIIKIEEHSAGGAGPPPKSPGSQLATHKQVQQSGGQGGGNNFFSAIG 1108
Fly 1109 TDFNGLASSTSTMFSGMFGKKSQQKQVPVQQKQPNVSAGKAKSGINFDPFPGRKGLVERTPLIKH 1173
Fly 1174 SGPRQTQEELTRQQNQERSHSNAENQTFLKDVTNQVLAGEGVGWLKLNRFKKLMEDESYRTLVLS 1238
Fly 1239 KLNKTLD-KKIAPDDHIDDVCVTKPVWKGMLKCIQAIAGGLDVTFANFGLGGMASVFQLMEVAHT 1302
Fly 1303 HYWSKEIN--------EGS-------DMSSSLLSSHAASPMGSRENLRSPSSPNG---------- 1342
Fly 1343 --------------SHSALGSEWASPQESRKSSTQLAHGGPGGSHSGAPINRRLSSADSQDGQST 1393
Fly 1394 TEMFKDMLSQKRSALKN-------MLTSFDSDTTTSKDSKKSSGNLWSGKSTLSAGFRYT----- 1446
Fly 1447 GGHLINTSSS-----------------------------------PSPD-SPRVYLFEGLLGKD- 1474
Fly 1475 --------------------RLNLWNQMQFWEDAFLDAVSQERDMIGMDQGPIEMMERYKSLSES 1519
Fly 1520 ERKRLEHDEDRLLSTMLYNLTAILVMLNVAKDEIRRKIRRLLGKSHIGLVYSQEVHNVVDQINNL 1584
Fly 1585 NGNDIDLKPLGSRLLHRQSFTVHQGTDVNGPLRFMEVRDDGLVLRSVDGTIVERWWYERLVNMTY 1649
Fly 1650 SPKTKLLCLWRRNGGQTQLHKYYTRKCKELYNCIKEAMERGGTPTNV----PELGGEFPVQDMNT 1710
Fly 1711 GEGGLLQVCLEGVGLLFSNS---KFFVRLDHIRKCFTQKGGIFVLEEYNPKTRNLIQRKYQSSMS 1772
Fly 1773 DQICYSVLCVFSYVAA 1788 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rab3-GEF | NP_001259560.1 | uDENN | 10..111 | CDD:214824 | 56/100 (56%) |
DENN | 260..486 | CDD:214823 | 151/227 (67%) | ||
dDENN | 613..681 | CDD:129037 | 44/67 (66%) | ||
madd | XP_012816822.1 | uDENN | 8..98 | CDD:214824 | 56/100 (56%) |
DENN | 162..391 | CDD:214823 | 152/229 (66%) | ||
dDENN | 492..560 | CDD:129037 | 44/67 (66%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 744 | 1.000 | Domainoid score | I99 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H14249 | |
Inparanoid | 1 | 1.050 | 1072 | 1.000 | Inparanoid score | I248 |
OMA | 1 | 1.010 | - | - | QHG48534 | |
OrthoDB | 1 | 1.010 | - | - | D162625at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0006143 | |
OrthoInspector | 1 | 1.000 | - | - | oto103875 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR13008 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4941 |
SonicParanoid | 1 | 1.000 | - | - | X4435 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
11 | 11.200 |