DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5599 and LAT1

DIOPT Version :9

Sequence 1:NP_573000.1 Gene:CG5599 / 32441 FlyBaseID:FBgn0030612 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_014328.3 Gene:LAT1 / 855653 SGDID:S000005015 Length:482 Species:Saccharomyces cerevisiae


Alignment Length:490 Identity:133/490 - (27%)
Similarity:225/490 - (45%) Gaps:65/490 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 ISQRAALRRCLHVT----SSLDKTVSFNLSDIGEGIREVTVKEWFVKEGDTVEQFDNLCEVQSDK 79
            ||:.:.|.|.|.:.    :|..:.....:..:...:.:..:..|..||||.:...:.:.|:::||
Yeast    11 ISRSSVLTRSLRLQLRCYASYPEHTIIGMPALSPTMTQGNLAAWTKKEGDQLSPGEVIAEIETDK 75

  Fly    80 ASVTITSRYDGKITKI--HHKIDEIALVGKPLLDFDVVNEDEDEP-------EDS-SSSSSSTSS 134
            |.:....:.||.:.||  .....:|. |.||:..:  |.:..|.|       ||| |.|.:||.:
Yeast    76 AQMDFEFQEDGYLAKILVPEGTKDIP-VNKPIAVY--VEDKADVPAFKDFKLEDSGSDSKTSTKA 137

  Fly   135 DSSASENEEKQSAEASATPT-------------EGRVIIPATPSVRRLAKEHQLDLAKVPATGKN 186
            ..:..:.|:||.|.|..|.|             :||:.  |:|..:.:|.|..:.|..|..||..
Yeast   138 QPAEPQAEKKQEAPAEETKTSAPEAKKSDVAAPQGRIF--ASPLAKTIALEKGISLKDVHGTGPR 200

  Fly   187 GRVLKGDILEFLGQVPPGTNVPHPTLLAKTPSAAPSGAASVSVPADR---------VEVLKGVRK 242
            ||:.|.||..:|.:....::..... .|.||:||.|...:.|.|:..         :..::.:..
Yeast   201 GRITKADIESYLEKSSKQSSQTSGA-AAATPAAATSSTTAGSAPSPSSTASYEDVPISTMRSIIG 264

  Fly   243 AMLKSMTESLKIPHFAYSDEIDMTQLMQFRNQLQLVAKENGVPKLTFMPFCIKAASIALSKYPIV 307
            ..|...|:.  ||.:..|.:|.:::|::.|..|...|  |...||:.....:||.::|..:.|..
Yeast   265 ERLLQSTQG--IPSYIVSSKISISKLLKLRQSLNATA--NDKYKLSINDLLVKAITVAAKRVPDA 325

  Fly   308 NSSLDLASESLV--FKGAHNISVAIDTPQGLVVPNIKNCQTKTIIEIAKDLNALVERGRTGSLSP 370
            |:.. |.:|:::  ||.. ::|||:.||.||:.|.:|||:.|.:.:|:.::..||:|.|...|:|
Yeast   326 NAYW-LPNENVIRKFKNV-DVSVAVATPTGLLTPIVKNCEAKGLSQISNEIKELVKRARINKLAP 388

  Fly   371 ADFADGTFSLSNIGVIGGTYTHPCIMAPQ----VAIGAMGR-----TKAVPRFNDKDEVVKAYVM 426
            .:|..||..:||:|:.........|:.|.    :||..:.|     ..|...|:..::|      
Yeast   389 EEFQGGTICISNMGMNNAVNMFTSIINPPQSTILAIATVERVAVEDAAAENGFSFDNQV------ 447

  Fly   427 SVSWSADHRVIDGVTMASFSNVWKQYLENPALFLL 461
            :::.:.|||.|||...|.|....|..:|||...||
Yeast   448 TITGTFDHRTIDGAKGAEFMKELKTVIENPLEMLL 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5599NP_573000.1 lipoyl_domain 39..109 CDD:133458 16/71 (23%)
PLN02528 41..462 CDD:215289 127/464 (27%)
E3_binding 161..194 CDD:280908 11/32 (34%)
2-oxoacid_dh 248..461 CDD:278621 66/223 (30%)
LAT1NP_014328.3 PDHac_trf_mito 36..482 CDD:273567 125/463 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0508
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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