DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbct and PDX1

DIOPT Version :10

Sequence 1:NP_573000.1 Gene:Dbct / 32441 FlyBaseID:FBgn0030612 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_011709.1 Gene:PDX1 / 853107 SGDID:S000003425 Length:410 Species:Saccharomyces cerevisiae


Alignment Length:419 Identity:88/419 - (21%)
Similarity:164/419 - (39%) Gaps:111/419 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 NCISQRAALRRC--------LHVTSSLDKTVSFNLSDIGEGIREVTVKEWFVKEGDTVEQFDNLC 73
            :.||:.:.|:.|        .|.::.|....:|::..:...:.:..:..|..|.|:.....|.:.
Yeast     3 SAISKVSTLKSCTRYLTKCNYHASAKLLAVKTFSMPAMSPTMEKGGIVSWKYKVGEPFSAGDVIL 67

  Fly    74 EVQSDKASVTITSRYDGKITKI-----HHKIDEIALVGKPLLDFDVVNEDEDE---PEDSSSSSS 130
            ||::||:.:.:.:..|||:.||     ...:|    ||:|:.....|::|...   |::::::::
Yeast    68 EVETDKSQIDVEALDDGKLAKILKDEGSKDVD----VGEPIAYIADVDDDLATIKLPQEANTANA 128

  Fly   131 ST------SSDSSASENEEKQSAEASATP------TEGRVIIPATPSVRRLAKEHQLD----LAK 179
            .:      |:||  :|..::...:|:.||      ::..:.....|||..|..|:.:.    |.:
Yeast   129 KSIEIKKPSADS--TEATQQHLKKATVTPIKTVDGSQANLEQTLLPSVSLLLAENNISKQKALKE 191

  Fly   180 VPATGKNGRVLKGDILEFLGQVPPG-----------------TNVPHPTLLAKTPSAAPSGAAS- 226
            :..:|.|||:||||:|.:||::|..                 :|:....|..|....|.:.||. 
Yeast   192 IAPSGSNGRLLKGDVLAYLGKIPQDSVNKVTEFIKKNERLDLSNIKPIQLKPKIAEQAQTKAADK 256

  Fly   227 -----------------VSVPADRVEVLKGVRKAMLKSMTESLKIPH--------FAYSDEIDMT 266
                             .|:|.|::.      :::...|.|:.:..|        ..|.|.|   
Yeast   257 PKITPVEFEEQLVFHAPASIPFDKLS------ESLNSFMKEAYQFSHGTPLMDTNSKYFDPI--- 312

  Fly   267 QLMQFRNQLQLVAKENGVPKLTFMPFCIKAASIALSKYPIVNSSLDLASESLVFKGAHNISVAID 331
                |.:.:.|..:|   |:..|        |..|.:.|..|:..|...:..:|    ::....|
Yeast   313 ----FEDLVTLSPRE---PRFKF--------SYDLMQIPKANNMQDTYGQEDIF----DLLTGSD 358

  Fly   332 TPQGLVVPNIKNCQTKTIIEIAKDLNALV 360
            .....|.|..||...|.  |....||..|
Yeast   359 ATASSVRPVEKNLPEKN--EYILALNVSV 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DbctNP_573000.1 PLN02528 41..462 CDD:215289 82/387 (21%)
PDX1NP_011709.1 PDHac_trf_mito 37..>217 CDD:273567 45/185 (24%)

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