DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5599 and Dlst

DIOPT Version :9

Sequence 1:NP_573000.1 Gene:CG5599 / 32441 FlyBaseID:FBgn0030612 Length:462 Species:Drosophila melanogaster
Sequence 2:XP_006240368.1 Gene:Dlst / 299201 RGDID:1359615 Length:479 Species:Rattus norvegicus


Alignment Length:443 Identity:132/443 - (29%)
Similarity:203/443 - (45%) Gaps:100/443 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 EGIREVTVKEWFVKEGDTVEQFDNLCEVQSDKASVTITSRYDGKITKIHHKIDEIALV------- 105
            |.:.|..|: |....||.|.:.:.:||:::||.||.:.|..:|        |.|..||       
  Rat   106 ESVTEGDVR-WEKAVGDAVAEDEVVCEIETDKTSVQVPSPANG--------IIEALLVPDGGKVE 161

  Fly   106 -GKPLLDFDVVNEDEDEPEDSSSSSSSTSSDSSASENEEKQSAEASATPTEGRVIIPATPSVRRL 169
             |.||.                     |...:.|:..:.| .|||.||..:.....||.|..   
  Rat   162 GGTPLF---------------------TLRKTGAAPAKAK-PAEAPATAHKAAPEAPAAPPP--- 201

  Fly   170 AKEHQLDLAKVPATGKNGRVLKGDILEFLGQVPPGTNVPHPT-------LLAKTPSAAP----SG 223
                  .:|.||.                 |:||   ||.|:       :.|..|:|||    :|
  Rat   202 ------PVAPVPT-----------------QMPP---VPSPSQPPSSKPVSAIKPTAAPPLAEAG 240

  Fly   224 AASVSVPADRVEVLKGVRKAMLKSMTES----LKIPHFAYSDEIDMT--QLMQFRNQLQLVAKEN 282
            ||. .:.::..|.:..:|:.:.:.:.|:    ..:..|   :|:||:  |.|:.|::...:.|.|
  Rat   241 AAK-GLRSEHREKMNRMRQRIAQRLKEAQNTCAMLTTF---NEVDMSNIQEMRARHKDAFLKKHN 301

  Fly   283 GVPKLTFMPFCIKAASIALSKYPIVNSSLDLASESLVFKGAHNISVAIDTPQGLVVPNIKNCQTK 347
              .||.||...:||::.||.:.|:||:.:|.|::.:|::...:||||:.||:|||||.|:|.:|.
  Rat   302 --LKLGFMSAFVKASAFALQEQPVVNAVIDDATKEVVYRDYIDISVAVATPRGLVVPVIRNVETM 364

  Fly   348 TIIEIAKDLNALVERGRTGSLSPADFADGTFSLSNIGVIGGTYTHPCIMAPQVAI----GAMGRT 408
            ...:|.:.:|.|.|:.|...|:..|...|||::||.||.|..:..|.|..||.||    |...|.
  Rat   365 NYADIERTINELGEKARKNELAIEDMDGGTFTISNGGVFGSLFGTPIINPPQSAILGMHGIFDRP 429

  Fly   409 KAVPRFNDKDEVVKAYVMSVSWSADHRVIDGVTMASFSNVWKQYLENPALFLL 461
            .||   ..|.||  ..:|.|:.:.|||:|||....:|....|..:|:|.:.||
  Rat   430 VAV---GGKVEV--RPMMYVALTYDHRLIDGREAVTFLRKIKAAVEDPRVLLL 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5599NP_573000.1 lipoyl_domain 39..109 CDD:133458 20/68 (29%)
PLN02528 41..462 CDD:215289 132/443 (30%)
E3_binding 161..194 CDD:280908 6/32 (19%)
2-oxoacid_dh 248..461 CDD:278621 78/222 (35%)
DlstXP_006240368.1 sucB 97..479 CDD:273565 132/443 (30%)
lipoyl_domain 97..169 CDD:133458 22/92 (24%)
2-oxoacid_dh 264..477 CDD:278621 78/222 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0508
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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