DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5599 and Pdhx

DIOPT Version :9

Sequence 1:NP_573000.1 Gene:CG5599 / 32441 FlyBaseID:FBgn0030612 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_780303.1 Gene:Pdhx / 27402 MGIID:1351627 Length:501 Species:Mus musculus


Alignment Length:493 Identity:135/493 - (27%)
Similarity:228/493 - (46%) Gaps:65/493 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LRNGATCWLLRNCISQRAALRRCLHVTSSLD-KTVSFNLSDIGEGIREVTVKEWFVKEGDTVEQF 69
            |..||..|.:     .|.|..|..|.|..|. ..:...:..:...:.:..:.:|..|||:.|...
Mouse    28 LAQGAAAWPV-----DRGASWRWFHSTQLLQADPIKVLMPSLSPTMEQGNIVKWLRKEGEAVSAG 87

  Fly    70 DNLCEVQSDKASVTITSRYDGKITKIHHKIDE----------IALVGKPLLDFDVVNEDED---- 120
            |:|||:::|||.||:.:..||.:.||  .::|          |||         :|.|.||    
Mouse    88 DSLCEIETDKAVVTLDANDDGILAKI--VVEEGAKNIQLGSLIAL---------MVEEGEDWKQV 141

  Fly   121 -EPEDSSSSSSSTSSDSSASENEEKQSAEASATPTEGRVIIPATPSVRRLAKEHQLDLAKVPATG 184
             .|:|.|:....:...:....:.:.|....:....:|......:|:.|.:.::|.||.::..|||
Mouse   142 EIPKDVSAPPPVSKPPAPTQPSPQPQIPCPARKEHKGTARFRLSPAARNILEKHSLDASQGTATG 206

  Fly   185 KNGRVLKGDILEF-----LGQVPPG--TNVPHPTLLAKTPSAAPSGAA-------SVSVPADR-- 233
            ..|...|.|.|:.     :|::...  .:.|.|:|.|..|..|.:|.:       .||:|...  
Mouse   207 PRGIFTKEDALKLVELKQMGKITESRPASAPPPSLSASVPPQATAGPSYPRPMTPPVSIPGQPNA 271

  Fly   234 ----VEV-LKGVRKAMLKSMTESLK-IPHFAYSDEIDMTQLMQFRNQLQLVAKENGVPKLTFMPF 292
                .|: ...:|:.:.|.:|||.. :||...:.:.|:..:::.|..|   .|::  .|::...|
Mouse   272 AGTFTEIPASNIRRVIAKRLTESKSTVPHAYATADCDLGAVLKVRRDL---VKDD--IKVSVNDF 331

  Fly   293 CIKAASIALSKYPIVNSSLDLASESLVFKGAHNISVAIDTPQGLVVPNIKNCQTKTIIEIAKDLN 357
            .|:||::.|.:.|.||.:.|  .|......:.:||||:.|.:||:.|.||:...|.|.|||..:.
Mouse   332 IIRAAAVTLKQMPGVNVTWD--GEGPKQLPSVDISVAVATDKGLITPIIKDAAAKGIQEIADSVK 394

  Fly   358 ALVERGRTGSLSPADFADGTFSLSNIGVIGGTYTHPCIMAPQVAIGAMGRTKAVPRFNDKDE--- 419
            .|.::.|.|.|.|.::..|:||:||:|:.|.......|..||..|.|:||.:.|.:..:.:|   
Mouse   395 VLSKKARDGKLMPEEYQGGSFSISNLGMFGIDEFAAVINPPQACILAVGRFRPVLKLTEDEEGNP 459

  Fly   420 -VVKAYVMSVSWSADHRVIDGVTMASFSNVWKQYLENP 456
             :.:..:::|:.|:|.||:|......|...:|..||||
Mouse   460 QLQQHQLITVTMSSDSRVVDDELATRFLETFKANLENP 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5599NP_573000.1 lipoyl_domain 39..109 CDD:133458 22/79 (28%)
PLN02528 41..462 CDD:215289 125/457 (27%)
E3_binding 161..194 CDD:280908 10/32 (31%)
2-oxoacid_dh 248..461 CDD:278621 68/214 (32%)
PdhxNP_780303.1 lipoyl_domain 57..131 CDD:133458 22/84 (26%)
PDHac_trf_mito 58..500 CDD:273567 125/458 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 145..176 3/30 (10%)
E3_binding 183..215 CDD:280908 10/31 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 228..256 7/27 (26%)
2-oxoacid_dh 291..500 CDD:278621 68/214 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0508
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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