DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5599 and pdhx

DIOPT Version :9

Sequence 1:NP_573000.1 Gene:CG5599 / 32441 FlyBaseID:FBgn0030612 Length:462 Species:Drosophila melanogaster
Sequence 2:XP_031756296.1 Gene:pdhx / 100379696 XenbaseID:XB-GENE-955123 Length:484 Species:Xenopus tropicalis


Alignment Length:482 Identity:142/482 - (29%)
Similarity:229/482 - (47%) Gaps:77/482 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 RCLHVTSSLDKT--VSFNLSDIGEGIREVTVKEWFVKEGDTVEQFDNLCEVQSDKASVTITSRYD 89
            |.||....|...  |...:..:...:.|..:.:|..|||:||...|.|||:::|||.||:.|..|
 Frog    30 RALHTAGILRGVPGVQVFMPALSPTMEEGNIVKWMKKEGETVSAGDALCEIETDKAVVTMESNDD 94

  Fly    90 GKITKIHHKIDE----------IALVGKPLLDFDVVNEDED-EPEDSSSSSSSTSSDSSASENEE 143
            |.:.||  .::|          |||         :|.|.:| :..|..|...|.::.::|:    
 Frog    95 GVLAKI--LVEEGSRNVRLGSLIAL---------LVEEGQDWKQVDIPSVKVSPTAAAAAT---- 144

  Fly   144 KQSAEASATPTEGRVIIPA-------TPSVRRLAKEHQLDLAKVPATGKNGRVLKGDILEFLGQ- 200
             |||:..|.    :.:.||       :|:.|.:...|.||.:.:..:|..|.:.|.|.|:||.| 
 Frog   145 -QSADVPAP----QPVAPAAKLGLRMSPAARHIIGTHGLDSSSITPSGPRGILTKEDALKFLAQK 204

  Fly   201 -------VPPGTNVPHPTLLAKTPSAAPSGAAS------VSVPA-DRVEVL------KGVRKAML 245
                   :....:.|...|.|..|:|||:..:.      :|:|. ...|.:      ..:||.:.
 Frog   205 KVSGEKPIAAAPSPPPEKLPASPPAAAPAPVSGRPFFPPMSIPGKPHTEGMFSEIPASNIRKVIA 269

  Fly   246 KSMTES-LKIPHFAYSDEIDMTQLMQFRNQLQLVAKENGVPKLTFMPFCIKAASIALSKYPIVNS 309
            |.:.|| ..|||...:.:.||..:|:.|.:|   ||:|  .|::...|.|||.:.||.:.|.||.
 Frog   270 KRLMESKSSIPHAYATTDCDMGAVMRLRKEL---AKDN--IKVSVNDFIIKATAAALKQMPEVNV 329

  Fly   310 SLDLASESLVFKGAHNISVAIDTPQGLVVPNIKNCQTKTIIEIAKDLNALVERGRTGSLSPADFA 374
            :.:  .|........:||:|:.|.:||:.|.||...:|.|.|||.....|.::.|.|.|.|.::.
 Frog   330 TWN--GEGAAPLETIDISIAVATDRGLITPIIKQAASKGIQEIAATAKVLAQKARDGKLLPEEYQ 392

  Fly   375 DGTFSLSNIGVIGGTYTHPCIMAPQVAIGAMGRTKAVPRFNDKDE----VVKAYVMSVSWSADHR 435
            .|:||:||:|:.|.|.....|..||..|.|:||::......:.:|    :.:.:||:|:.|:|.|
 Frog   393 GGSFSISNLGMFGITGFSAVINPPQSCILAVGRSRVELDLAEGEEGNPQLCQKHVMNVTLSSDGR 457

  Fly   436 VIDGVTMASFSNVWKQYLENPALFLLH 462
            ::|....:.|.:.:::.||||    ||
 Frog   458 LVDDELASKFLDCFRKNLENP----LH 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5599NP_573000.1 lipoyl_domain 39..109 CDD:133458 26/79 (33%)
PLN02528 41..462 CDD:215289 135/464 (29%)
E3_binding 161..194 CDD:280908 10/39 (26%)
2-oxoacid_dh 248..461 CDD:278621 71/217 (33%)
pdhxXP_031756296.1 PDHac_trf_mito 48..479 CDD:273567 135/461 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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