DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lsd-2 and plin2

DIOPT Version :10

Sequence 1:NP_572996.1 Gene:Lsd-2 / 32437 FlyBaseID:FBgn0030608 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_001025433.1 Gene:plin2 / 794841 ZFINID:ZDB-GENE-050913-12 Length:428 Species:Danio rerio


Alignment Length:330 Identity:76/330 - (23%)
Similarity:137/330 - (41%) Gaps:74/330 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 RIIKLPVVNAAWDKSQDVYGKVKGKNRVFEWALTAAEDCVTRAVTTAA-----PFVTKLDRPIAY 101
            ||:.||:|.:.:|...:||...|..:...:.....||:.| :::|:||     |.:.||:..|:.
Zfish    15 RIVHLPLVVSTYDMMSNVYVNTKNNHPYLKSVCEVAENGV-KSITSAAFHSALPIIGKLEPQISM 78

  Fly   102 VDQTLVKGIDKLEVKAPIIKDTPQEIYNQAKSKVIDVVQPHLERVVKFKAAGQQKAASLKDLAWQ 166
            .:....||:||:|...||:....::|...||..|...     :..|....:|.:::.|:      
Zfish    79 ANDLACKGLDKIEKTLPILHKPSEQIMANAKDAVTGA-----KEAVSGTVSGAKESVSI------ 132

  Fly   167 KANEVLATQYGSL---------AVNG-----------------VDTTTALAERLLEYYFPKCESD 205
            ..|:|:....|::         .|:|                 ||...:.:|.|||:|.|     
Zfish   133 TLNDVMDRTRGAVQGSVEKTKTVVSGGVQTVMDSRMLKLVSSRVDNALSTSETLLEHYLP----- 192

  Fly   206 VEEDNDDKQNAVVQNGKSSENDMPVPASEDPVLHTVQTVGRLSNKISRRVYRNVSRQIKQ-VQKG 269
               :|::::....:|.:..|||      .|...:.|: :|.||.|:..|.|:....:::. ||:|
Zfish   193 ---ENEEEKEGEERNTEGLEND------SDLANYYVR-LGSLSIKVRDRTYQRAVEKVRHAVQRG 247

  Fly   270 NINDYLSSLIAALKLHQYI------------NFINSSMG-TNVEQSGGSSSDACSPFGTTTSTTT 321
              .:.:|.|...:.:.::.            ..:.|.|| .:|.||..:.|:..|......|.|.
Zfish   248 --QESISQLNHTMDIIEFTRKNIDGSNQKLQEKLGSLMGWKSVSQSQETESETDSEAEQIESRTL 310

  Fly   322 TTTTS 326
            |...|
Zfish   311 TIAHS 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lsd-2NP_572996.1 Perilipin 40..>301 CDD:460784 68/303 (22%)
plin2NP_001025433.1 Perilipin 5..408 CDD:460784 76/330 (23%)

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