DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lsd-2 and Plin3

DIOPT Version :9

Sequence 1:NP_572996.1 Gene:Lsd-2 / 32437 FlyBaseID:FBgn0030608 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_080112.1 Gene:Plin3 / 66905 MGIID:1914155 Length:437 Species:Mus musculus


Alignment Length:322 Identity:70/322 - (21%)
Similarity:132/322 - (40%) Gaps:70/322 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 TGNGTAMNDVDQPKDAKDLL--PHLES--LERIIKLP-------VVNAAWDKSQDVYGKVKGKNR 68
            :.|||     |.|.:|:..:  |.::.  ::|:..||       :|:||:..:::.|..|:   .
Mouse     2 SSNGT-----DAPAEAQAAMEEPVVQPSVVDRVAGLPLISSTYGMVSAAYTSTKENYPHVR---T 58

  Fly    69 VFEWALTAAEDCVTRAVTTAAPFVTKLDRPIAYVDQTLVKGIDKLEVKAPIIKDTPQEIYNQAKS 133
            |.:.|....:...|.||:||.|.::||:..||...:...:|:|:|:...||::...:::....|.
Mouse    59 VCDVAEKGVKTLTTAAVSTAQPILSKLEPQIATASEYAHRGLDRLQESLPILQQPTEKVLADTKE 123

  Fly   134 KVIDVVQPHLERVVKFKAAGQQKAAS-------------------LKDLAWQKANEVLATQYGSL 179
            .|...|....|.|....::.::..|:                   .|.........|:.::.|.:
Mouse   124 LVSSTVSGAQEMVSSSVSSAKETVATRVTGAVDVTLGAVQNSVDKTKSAMTSGVQSVMGSRVGQM 188

  Fly   180 AVNGVDTTTALAERLLEYYFPKCESDV------EEDND--------DKQNAVVQNGKSSENDMPV 230
            .::|||.....:|...:...|..|:::      .||:|        .:||..|:.|..||. :..
Mouse   189 VISGVDRVLVKSEAWADNRLPLTEAELALIATPPEDSDMASLQQQRQEQNYFVRLGSLSER-LRN 252

  Fly   231 PASEDPVLHTVQTVGRLSNKISRRVYRNVSRQIKQV------QKGNINDYLSSLIAALKLHQ 286
            .|.|       .::|:|.|  :|:..:...:|:..|      .|..::..|..  ...||||
Mouse   253 HAYE-------HSLGKLQN--ARQKAQETLQQLTSVLGLMESVKQGVDQRLGE--GQEKLHQ 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lsd-2NP_572996.1 Perilipin 40..>287 CDD:281086 63/293 (22%)
Plin3NP_080112.1 Perilipin 19..415 CDD:281086 64/300 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847357
Domainoid 1 1.000 57 1.000 Domainoid score I10809
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 57 1.000 Inparanoid score I5419
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1437332at2759
OrthoFinder 1 1.000 - - FOG0001967
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR14024
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4632
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.030

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