DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lsd-2 and plin1

DIOPT Version :9

Sequence 1:NP_572996.1 Gene:Lsd-2 / 32437 FlyBaseID:FBgn0030608 Length:352 Species:Drosophila melanogaster
Sequence 2:XP_031754076.1 Gene:plin1 / 594876 XenbaseID:XB-GENE-949442 Length:447 Species:Xenopus tropicalis


Alignment Length:420 Identity:81/420 - (19%)
Similarity:148/420 - (35%) Gaps:126/420 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 DVDQPK----DAKDLLPHLESLERIIKLPVVNAAWDKSQDVYGKVKGKNRV-------FEWALTA 76
            |:..||    ..||     ..:||.:.|.||:...|..|:.|..:|..:.:       :|..:..
 Frog    28 DITSPKSPNGSGKD-----NVIERFLHLGVVSCTIDSLQNKYVNMKQAHPLVGSVCGFYEKGVQT 87

  Fly    77 AEDCVTRAVTTAAPFVTKLDRPIAYVDQTLVKGIDKLEVKAPIIKDTPQEIYNQAKSKVIDVVQP 141
            |.   |.||.:..|.|...:..|:..::...||:|.||.|.|.:...|.:|..:.|..:...:| 
 Frog    88 AG---TLAVRSIQPVVKTFEHQISAANEIACKGMDHLESKVPALHFPPDKIAFELKESISATIQ- 148

  Fly   142 HL------------ERVVKFKAAG----QQKAASLKDLAWQKANEVLATQYGSLAVNGVDTTTAL 190
            |.            ::|:...:||    .......||.|:.|....:||          ||...:
 Frog   149 HARSGFGSPITNTSDKVLGVASAGFGITVNAMNGAKDYAFSKRLSQMAT----------DTVYVV 203

  Fly   191 ---AERLLEYYFPKCESDVEEDNDDKQNAVVQNGKSSENDMPVPASEDPVLHTVQTVGRLSNKIS 252
               .|::::|..|:     :|:.:......||:.:|    :.:|.|     ..:..:|.|::::.
 Frog   204 LYNMEKIVDYMLPQ-----QEECEKPDGMTVQSYES----LSLPPS-----GLLPRIGALASRVF 254

  Fly   253 RRVYRNVSRQIKQVQ-KGNINDYLSSLIAALKLHQ-------------YINFINSSMGT------ 297
            :...:...:.|:..: ||  .::|...:|..|..|             |::.::|...|      
 Frog   255 QHTTQWTYKTIEDARNKG--QNWLPGSVALSKEPQSLLVSVTRNLQSVYLSAVSSVKKTPSAVWE 317

  Fly   298 -------NVEQSGGS-SSDACSPFGTT---------------TSTTTTTTTSSTSNNKPVVAL-- 337
                   ||...|.| :.|..:..|.|               ..|....||.......|..::  
 Frog   318 TARGLLLNVPWQGLSFAKDTLATIGGTLLQFKDKVLPNQKVKEKTRKKKTTEKKEQEAPRDSVRQ 382

  Fly   338 ----------------PHVAKSKRAPAVSS 351
                            .|::...:.|||::
 Frog   383 EKSVSFTADKTLKQREKHISLESKDPAVAA 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lsd-2NP_572996.1 Perilipin 40..>287 CDD:281086 58/286 (20%)
plin1XP_031754076.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1437332at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9506
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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