DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lsd-2 and zgc:77486

DIOPT Version :10

Sequence 1:NP_572996.1 Gene:Lsd-2 / 32437 FlyBaseID:FBgn0030608 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_998037.1 Gene:zgc:77486 / 405808 ZFINID:ZDB-GENE-040426-2056 Length:238 Species:Danio rerio


Alignment Length:55 Identity:16/55 - (29%)
Similarity:22/55 - (40%) Gaps:20/55 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   300 EQSGGSSSD-----ACSPFG---------------TTTSTTTTTTTSSTSNNKPV 334
            :|.||.:|.     |.||.|               ||.:.|.|...:|:|:..||
Zfish    41 QQGGGRNSPPGEKAATSPVGSPGASPVTVESTPLPTTEAGTPTEERTSSSSPSPV 95

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity