DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lsd-2 and plin2

DIOPT Version :9

Sequence 1:NP_572996.1 Gene:Lsd-2 / 32437 FlyBaseID:FBgn0030608 Length:352 Species:Drosophila melanogaster
Sequence 2:XP_012813567.1 Gene:plin2 / 394560 XenbaseID:XB-GENE-953135 Length:425 Species:Xenopus tropicalis


Alignment Length:337 Identity:76/337 - (22%)
Similarity:134/337 - (39%) Gaps:43/337 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 RIIKLPVVNAAWDKSQDVYGKVKGKNRVFEWALTAAEDCV----TRAVTTAAPFVTKLDRPIAYV 102
            |:|.||:|::.:|.....|...|..:...:.....||..|    :.|:|:|.|.:.:|:..||..
 Frog    14 RVISLPLVSSTYDMVSSAYTATKENHPYIKSVCDLAEKSVKSITSVALTSAMPIIHRLEPQIAVA 78

  Fly   103 DQTLVKGIDKLEVKAPIIKDTPQEIYNQAKSKVIDVVQPHLERVV----KFKAAGQQKAASLKDL 163
            :.....|:||:|.|.||:.....:|.:.|...|....:..|:.:.    |.|.|........|.:
 Frog    79 NNIACMGLDKIEEKLPILYQPSDKIVSNASDAVAGAKETVLQSITGVVDKTKGAVHDSVEMTKAV 143

  Fly   164 AWQKANEVLATQYGSLAVNGVDTTTALAERLLEYYFPKCESDVEEDNDDKQNAVVQNGKSSENDM 228
            .....|.||.:....:...||:|....:|.|||.|.|..:.::..:....:.  .::||      
 Frog   144 VNGSINTVLGSSVVQMMNTGVNTALTKSENLLEQYLPPTDEELAIEATKTEG--FESGK------ 200

  Fly   229 PVPASEDPVLHTVQTVGRLSNKISRRVYRNVSRQIKQVQKGNINDYLSSLIAALKLHQY----IN 289
             :|:      :.:: :|.||.|..:|.|:....:|... |....:.:|.|...:.|.::    :|
 Frog   201 -LPS------YYIR-LGSLSTKARKRAYQQALTRIGDA-KNRSQEAISQLHKTVDLIEFAKKNVN 256

  Fly   290 FINSS-MGTNVE---------QSGGSSSDACSP--FGTTTSTTTTTTTSSTSNNKPVVALPHVAK 342
            ..|.. :.|.||         ..|..|::....  ...|.:.|....|:..|....|..||...:
 Frog   257 NANQKLLNTWVEWTKGAGHAANEGSESAEQIESRILSMTRNLTQQLQTTCLSLAMSVQGLPQNIQ 321

  Fly   343 SK--RAPAVSSQ 352
            .|  |..|::.:
 Frog   322 DKAHRVSAMAGE 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lsd-2NP_572996.1 Perilipin 40..>287 CDD:281086 59/252 (23%)
plin2XP_012813567.1 Perilipin 5..390 CDD:397257 76/337 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1437332at2759
OrthoFinder 1 1.000 - - FOG0001967
OrthoInspector 1 1.000 - - mtm9506
Panther 1 1.100 - - LDO PTHR14024
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

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