DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lsd-2 and Plin1

DIOPT Version :10

Sequence 1:NP_572996.1 Gene:Lsd-2 / 32437 FlyBaseID:FBgn0030608 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_001295074.1 Gene:Plin1 / 25629 RGDID:3351 Length:518 Species:Rattus norvegicus


Alignment Length:249 Identity:63/249 - (25%)
Similarity:108/249 - (43%) Gaps:36/249 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 LPHLES-LERIIKLPVVNAAWDKSQDVYGKVKGKNRVFEWALTAAEDCVTRAVTTAA----PFVT 93
            ||..|: |:|:::||||:...:..|..|...|..:.:......|.|..|..|...||    |.|.
  Rat    14 LPEQENVLQRVLQLPVVSGTCECFQKTYNSTKEAHPLVASVCNAYEKGVQGASNLAAWSMEPVVR 78

  Fly    94 KLDRPIAYVDQTLVKGIDKLEVKAPIIKDTPQEIYNQAKSKV----------IDV-VQPHLERVV 147
            :|.......::...:|:|.||.|.|.::..|::|.::.|..:          |.| :....::|:
  Rat    79 RLSTQFTAANELACRGLDHLEEKIPALQYPPEKIASELKGTISTRLRSARNSISVPIASTSDKVL 143

  Fly   148 KFKAAGQQKAASL-KDLAWQKANEVLATQYGSLAVNGVDTTTALAERLLEYYFPKCESDVEEDND 211
            ....||.:.|..: |:.|...||    |:.|.||..|.|......|:::||..|          .
  Rat   144 GATLAGCELALGMAKETAEYAAN----TRVGRLASGGADLALGSIEKVVEYLLP----------P 194

  Fly   212 DKQNAVVQNGKSSENDMPVPASEDPVLHTVQTVGRLSNKISRRVYRNVSRQIKQ 265
            ||..:...:|:  :.....|.::..:|..|.|   |:|.:||...:..:|.:|:
  Rat   195 DKVESAPSSGR--QKMQKAPKAKPSLLRRVST---LANTLSRHTMQTTARALKR 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lsd-2NP_572996.1 Perilipin 40..>301 CDD:460784 60/242 (25%)
Plin1NP_001295074.1 Perilipin 13..417 CDD:460784 63/249 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 197..217 2/21 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 285..321
Required for interaction with CIDEC. /evidence=ECO:0000250 291..322
Blue background indicates that the domain is not in the aligned region.

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