DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lsd-2 and Plin2

DIOPT Version :9

Sequence 1:NP_572996.1 Gene:Lsd-2 / 32437 FlyBaseID:FBgn0030608 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_031434.3 Gene:Plin2 / 11520 MGIID:87920 Length:425 Species:Mus musculus


Alignment Length:282 Identity:68/282 - (24%)
Similarity:110/282 - (39%) Gaps:45/282 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 PHLESLERIIKLPVVNAAWDKSQDVYGKVKGK----NRVFEWALTAAEDCVTRAVTTAAPFVTKL 95
            |....:.|:..||:|::.:|.....|...|.:    ..|.|.|....:...:.|:|:|.|.:.||
Mouse     8 PQQSVVMRVANLPLVSSTYDLVSSAYVSTKDQYPYLRSVCEMAEKGVKTVTSAAMTSALPIIQKL 72

  Fly    96 DRPIAYVDQTLVKGIDKLEVKAPIIKDTPQEIYNQAKSKVI--------------DVVQPHLERV 146
            :..||..:....||:|::|.:.||:.....||...|:..|.              |.|...:..|
Mouse    73 EPQIAVANTYACKGLDRMEERLPILNQPTSEIVASARGAVTGAKDVVTTTMAGAKDSVASTVSGV 137

  Fly   147 V-KFKAAGQQKAASLKDLAWQKANEVLA-TQYGSLAVNGVDTTTALAERLLEYYFPKCESDVEED 209
            | |.|.|........|.:.....|.||. .|:.:   :|||.....:|.|::.|||..:.::|  
Mouse   138 VDKTKGAVTGSVERTKSVVNGSINTVLGMVQFMN---SGVDNAITKSELLVDQYFPLTQEELE-- 197

  Fly   210 NDDKQNAVVQNGKSSEN-DMPVPASEDPVLHTVQTVGRLSNKISRRVYRNVSRQIKQVQKGNIND 273
                     ...|..|. ||....|      ..:.:..||.|:..|.|.....::|:. |....:
Mouse   198 ---------MEAKKVEGFDMVQKPS------NYERLESLSTKLCSRAYHQALSRVKEA-KQKSQE 246

  Fly   274 YLSSLIAALKLHQYINFINSSM 295
            .:|.|.:.:.|   |.|...:|
Mouse   247 TISQLHSTVHL---IEFARKNM 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lsd-2NP_572996.1 Perilipin 40..>287 CDD:281086 64/267 (24%)
Plin2NP_031434.3 Perilipin 6..392 CDD:367309 68/282 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847355
Domainoid 1 1.000 57 1.000 Domainoid score I10809
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 57 1.000 Inparanoid score I5419
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001967
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR14024
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4632
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.020

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