DRSC/TRiP Functional Genomics Resources

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Protein Alignment dob and pnpla3

DIOPT Version :10

Sequence 1:NP_572995.1 Gene:dob / 32436 FlyBaseID:FBgn0030607 Length:480 Species:Drosophila melanogaster
Sequence 2:NP_001002338.2 Gene:pnpla3 / 436610 ZFINID:ZDB-GENE-040718-27 Length:473 Species:Danio rerio


Alignment Length:503 Identity:160/503 - (31%)
Similarity:235/503 - (46%) Gaps:115/503 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SLSFSGCGFLGIYHVGVAVCLRQHAPQLL--LERIAGASAGALAACCLICDLPLECMAGDFLRVV 70
            :|||:|||||||||:|||.||.:.||.|:  ..:|.|||||||.|..|..:..:|....|.:.|.
Zfish     9 NLSFAGCGFLGIYHIGVASCLLEQAPYLIRGATKIYGASAGALTASVLTTEACIEKCCEDVINVA 73

  Fly    71 QEIQRHSLGAFSPWFNLPECLLEGMRSWLPEDAHLLASGRLHISLTRVSDRRNVVMSEFSSRQEL 135
            :|.::.:||...|.||:.:.:..|:...||.:||.|:||||.:|||||.|.:||::|:|||::||
Zfish    74 KEARKRNLGPLHPTFNIVKVIRGGLYRDLPSNAHTLSSGRLCVSLTRVMDGQNVLVSDFSSKEEL 138

  Fly   136 LQALMCSCFIPGLSGLVPPQVRGVRYMDGAFSDNLPLLD-EHTVTVSPFCGESDICPRDQNPHLL 199
            :|||:||||||...||:||..|||||:||..|||||..: ::|:|||||.|||||||:|.:....
Zfish   139 IQALICSCFIPVYCGLIPPAFRGVRYVDGGISDNLPQSELKNTITVSPFSGESDICPKDNSTSFH 203

  Fly   200 QLNINWANTCIRLSRRNLRRMVRILVPGRADFMANFCQQGYDDTLQFLRRNSLLNEGFKIQEKGM 264
            :|  .:.||.|:.:..|..|:.:.|.|.....:|..||.||.|.|:||:.|:||.......:..:
Zfish   204 EL--RFTNTSIQFNLDNAYRLSKALFPPEPKVLAEMCQSGYKDALRFLQENNLLQAACPGVDMAL 266

  Fly   265 ISWIHQQMEREKELRETPRDLEKVHTNRMTTNNVQHKKRRNRKQRTQRQTLQRTKKNQQEKIRNG 329
            |             :.||            |.....||....::.|:...|:|            
Zfish   267 I-------------QATP------------TCCCPGKKNPVVEETTKEWVLRR------------ 294

  Fly   330 RSLEMEIRNQEKNHQESTNSSVENL-TPI------------------------------------ 357
                  :|...|:|.......|:|| |||                                    
Zfish   295 ------LRLLRKHHWWLDEQIVDNLPTPIKKVFCDACREKHGLLAQVTGLLPVRVASYMLLPYTL 353

  Fly   358 -------AEKRLENRPPE--EHNHYGSSLMGSTWSL--------------LRRVMFAPPLA--RH 397
                   |.:|.....||  ....:.:.:.|..:.|              |||.:..||:|  :.
Zfish   354 PVESAYSAAQRFWEWIPEVPADVRWLTEVAGGVYRLAWKGAASEANSGAPLRRCVSEPPMADLQM 418

  Fly   398 MVQVIARHLSQSLTLCDQPHFDLALMQAPAACHPSTTSCPPSTPLGDS 445
            .::....|:..|.:..|...:..     |...|.:::...|.:|:.:|
Zfish   419 PIKDCTGHIPHSASTLDSYKWTF-----PNNIHTTSSIDCPESPVSES 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dobNP_572995.1 Pat_iPLA2 7..253 CDD:132857 120/247 (49%)
pnpla3NP_001002338.2 None

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