DRSC/TRiP Functional Genomics Resources

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Protein Alignment dob and Pnpla2

DIOPT Version :9

Sequence 1:NP_572995.1 Gene:dob / 32436 FlyBaseID:FBgn0030607 Length:480 Species:Drosophila melanogaster
Sequence 2:NP_001101979.2 Gene:Pnpla2 / 361676 RGDID:1309044 Length:478 Species:Rattus norvegicus


Alignment Length:258 Identity:130/258 - (50%)
Similarity:172/258 - (66%) Gaps:13/258 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TRRSLSFSGCGFLGIYHVGVAVCLRQHAPQLLLE--RIAGASAGALAACCLICDLPLECMAGDFL 67
            |:.::||:||||||:||:|||.|||:|||.|:..  .|.|||||||.|..|:....|.....:.:
  Rat     6 TKWNISFAGCGFLGVYHIGVASCLREHAPFLVANATHIYGASAGALTATALVTGACLGEAGANII 70

  Fly    68 RVVQEIQRHSLGAFSPWFNLPE----CLLEGMRSWLPEDAHLLASGRLHISLTRVSDRRNVVMSE 128
            .|.:|.::..||...|.|||.:    |||:    .||.|.|..|||||.||||||||..||::|.
  Rat    71 EVSKEARKRFLGPLHPSFNLVKTIRGCLLK----TLPADCHTRASGRLGISLTRVSDGENVIISH 131

  Fly   129 FSSRQELLQALMCSCFIPGLSGLVPPQVRGVRYMDGAFSDNLPLLD-EHTVTVSPFCGESDICPR 192
            |||:.||:||.:||.|||...||:||.::||||:||..||||||.: ::|:|||||.|||||||:
  Rat   132 FSSKDELIQANVCSTFIPVYCGLIPPTLQGVRYVDGGISDNLPLYELKNTITVSPFSGESDICPQ 196

  Fly   193 DQNPHLLQLNINWANTCIRLSRRNLRRMVRILVPGRADFMANFCQQGYDDTLQFLRRNSLLNE 255
            |.:.::.:|.|  .||.|:.:.|||.|:.:.|.|.....:...|:|||.|.|:|||||.|||:
  Rat   197 DSSTNIHELRI--TNTSIQFNLRNLYRLSKALFPPEPMVLREMCKQGYRDGLRFLRRNGLLNQ 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dobNP_572995.1 Pat_iPLA2 7..253 CDD:132857 126/252 (50%)
EIN3 <270..>375 CDD:296674
Pnpla2NP_001101979.2 Pat_PNPLA2 4..252 CDD:132859 125/251 (50%)
GXGXXG. /evidence=ECO:0000255|PROSITE-ProRule:PRU01161 14..19 4/4 (100%)
GXSXG. /evidence=ECO:0000255|PROSITE-ProRule:PRU01161 45..49 3/3 (100%)
DGA/G. /evidence=ECO:0000255|PROSITE-ProRule:PRU01161 166..168 1/1 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 456..478
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3773
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 261 1.000 Inparanoid score I3023
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1204225at2759
OrthoFinder 1 1.000 - - FOG0000670
OrthoInspector 1 1.000 - - mtm8965
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12406
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1585
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.930

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