DRSC/TRiP Functional Genomics Resources

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Protein Alignment dob and pnpla2

DIOPT Version :9

Sequence 1:NP_572995.1 Gene:dob / 32436 FlyBaseID:FBgn0030607 Length:480 Species:Drosophila melanogaster
Sequence 2:XP_005174313.2 Gene:pnpla2 / 101887155 ZFINID:ZDB-GENE-120913-3 Length:486 Species:Danio rerio


Alignment Length:332 Identity:134/332 - (40%)
Similarity:185/332 - (55%) Gaps:37/332 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SLSFSGCGFLGIYHVGVAVCLRQHAPQLL--LERIAGASAGALAACCLICDLPLECMAGDFLRVV 70
            ::||:|||||||||:|||.||::|||.|:  ...|.|||||||.|..|:....|.....:.:.|.
Zfish     9 NISFAGCGFLGIYHIGVASCLQEHAPFLVENARHIYGASAGALTASALVTGACLGEAGANIIDVA 73

  Fly    71 QEIQRHSLGAFSPWFNLPECLLEGMRSWLPEDAHLLASGRLHISLTRVSDRRNVVMSEFSSRQEL 135
            :|.::..||...|.|||.:.:...:...:|.|.::.|:|||.||||||:|..||::|.|:|.:||
Zfish    74 KEARKRFLGPMHPSFNLVKIMRTHLHRVMPVDGYIRATGRLGISLTRVTDGENVLVSHFNSNEEL 138

  Fly   136 LQALMCSCFIPGLSGLVPPQVRGVRYMDGAFSDNLPLLD-EHTVTVSPFCGESDICPRD---QNP 196
            :||.:||.:||...||:||.::||||:||..|||||..: ::|:|||||.|||||||||   .|.
Zfish   139 VQACICSAYIPVYCGLIPPTLQGVRYVDGGISDNLPQYELKNTITVSPFSGESDICPRDVSSTNI 203

  Fly   197 HLLQLNINWANTCIRLSRRNLRRMVRILVPGRADFMANFCQQGYDDTLQFLRRNSLLN------- 254
            |    .:.:.||.|:.:..||.|:.|.|.|.....|.:.|:|||.|.|.||::|.||.       
Zfish   204 H----ELRFTNTSIQFTLANLYRVSRALFPPDPLVMKSMCKQGYRDALLFLKKNGLLQYRGPHRA 264

  Fly   255 -----EGFKIQEKGMISWIHQQMEREKELRETPRDLEKVHTNRMTTNNVQHKKRRNRKQ-----R 309
                 ||...:..|      :..||..|......|    |.:.|..:..:|...|..|.     |
Zfish   265 LAAAAEGADEESDG------EDEERRDEGEPEADD----HRSSMEEHVFEHLPPRVHKALVEACR 319

  Fly   310 TQRQTLQ 316
            .:|..||
Zfish   320 ERRSLLQ 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dobNP_572995.1 Pat_iPLA2 7..253 CDD:132857 116/250 (46%)
EIN3 <270..>375 CDD:296674 13/52 (25%)
pnpla2XP_005174313.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3773
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 274 1.000 Inparanoid score I2940
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1204225at2759
OrthoFinder 1 1.000 - - FOG0000670
OrthoInspector 1 1.000 - - mtm6600
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12406
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1585
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.970

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