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Protein Alignment opm and tmed1

DIOPT Version :9

Sequence 1:	NP_572994.1	Gene:	opm / 32435	FlyBaseID:	FBgn0264389	Length:	242	Species:	Drosophila melanogaster
Sequence 2:	NP_001039263.1	Gene:	tmed1 / 734138	XenbaseID:	XB-GENE-1017173	Length:	220	Species:	Xenopus tropicalis

Alignment Length:	220	Identity:	83/220 - (37%)
Similarity:	134/220 - (60%)	Gaps:	18/220 - (8%)

- Green bases have known domain annotations that are detailed below.

  Fly    11 LVLLLSIAALLLGVQDAEAYDKEMTVYVDAGKTECLYHSVRQGETIDFEYQVIDGGHGDLDISFT 75
            |.::|.:||.:.    .:..|.|:|..:.||:.||.|.:.....:::.||||| ||.| ||:.|:
Frog     8 LFIVLPLAAAVA----VQPQDTELTFLLPAGRQECFYQTTLYNGSMEIEYQVI-GGAG-LDVDFS 66

  Fly    76 LLDPIGLVIVSDFKKPENVHRHEVAKEGDYRFCFDNSFSMFNRKTVFFELIVEREGEELQGDTQ- 139
            :..|.|::::.:.::.:.||..|..:.|||..|||||||..:.|.||||||.:.:    |||.:
Frog    67 VTTPSGILLIMERRRSDGVHTVEPTEAGDYMICFDNSFSTISEKLVFFELIFDNQ----QGDEEP 127

  Fly   140 --WNEADELTGLSRDEYYDMKVQDIMDFIGRIRLQLTKARQLQDVLRSHEARDRNLAESNFQKVN 202
              |.:..|     .||..|:|::||.:.|..::.:|.::.|:|.|||:.|||||||.:||.::||
Frog   128 DSWADVVE-----PDELLDIKLEDIKESIESVKSRLERSIQMQTVLRAFEARDRNLQDSNLERVN 187

  Fly   203 HWSMVQISAMIGVGLIQVFMLRSIF 227
            .||.:.:..::.|..:||:||:|:|
Frog   188 FWSAINVGVLVTVAFLQVYMLKSLF 212

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.