Protein Alignment opm and Tmed2

DIOPT Version :9

• Sequence 1: NP_572994.1
• Gene: opm / 32435
• FlyBaseID: FBgn0264389
• Length: 242
• Species: Drosophila melanogaster
• Sequence 2: NP_001380734.1
• Gene: Tmed2 / 65165
• RGDID: 69243
• Length: 208
• Species: Rattus norvegicus
• Alignment Length: 215
• Identity: 51/215 - (23%)
• Similarity: 90/215 - (41%)
• Gaps: 19/215 - (8%)

  Fly    13 LLLSIAALLLGVQDAEAYDKEMTVYVDAGKTECLYHSVRQGETIDFEYQVIDGGHGDLDISFTLL 77
            ||:.:||||   ..|..|    .|.:||...||.:..|..|..:...::|.:||..|:|:..|..
  Rat     7 LLVLLAALL---ATASGY----FVSIDAHAEECFFERVTSGTKMGLIFEVAEGGFLDIDVEITGP 64

  Fly    78 DPIGLVIVSDFKKPENVHRHEVAKEGDYRFCFDNSFSMFNRKTVFFELIVEREGEELQGDTQWNE 142
            |..|  |....::....:......:|.|:|||.|..|....|.|.|.:.:   ||..:|.....|
  Rat    65 DNKG--IYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDI---GEAPKGQDMETE 124

  Fly   143 ADELTGLSRDEYYDMKVQDIMDFIGRIRLQLTKARQLQDVLRSHEARDRNLAESNFQKVNHWSMV 207
            ..       .:.:|.....:.:.|..:.:.:|..:..|:.:...|...|.:.::...:|..||..
  Rat   125 GG-------GDSWDAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFF 182

  Fly   208 QISAMIGVGLIQVFMLRSIF 227
            :...::.:.|.|::.|:..|
  Rat   183 EALVLVAMTLGQIYYLKRFF 202

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
opm	NP_572994.1	EMP24_GP25L	33..227	CDD:279450	42/193 (22%)
Tmed2	NP_001380734.1	EMP24_GP25L	23..203	CDD:395878	43/192 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000272
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.910