DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment opm and Tmed4

DIOPT Version :9

Sequence 1:	NP_572994.1	Gene:	opm / 32435	FlyBaseID:	FBgn0264389	Length:	242	Species:	Drosophila melanogaster
Sequence 2:	XP_006251506.1	Gene:	Tmed4 / 305502	RGDID:	1306319	Length:	227	Species:	Rattus norvegicus

Alignment Length:	239	Identity:	57/239 - (23%)
Similarity:	97/239 - (40%)	Gaps:	46/239 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly     7 GMPGLVLL-LSIAALLLGVQDAEAYDKEMTVYVDAGKTE--CLYHSVRQGETI----------DF 58
            ||...||| |::.|  .|.:.         :|...|:||  |....: ..||:          |.
  Rat    11 GMVRFVLLVLTVCA--AGARG---------LYFHIGETEKRCFIEEI-PDETMVIGNYRTQMWDK 63

  Fly    59 EYQVIDGGHGDLDISFTLLDPIGLVIVSDFKKPENVHRHEVAKEGDYRFCFDNS---FSMF--NR 118
            :.:|.......|.:...:.||.|.|::|.....|..........||::.|..::   .::|  .:
  Rat    64 QKEVFLPSTPGLGMHVEVKDPDGKVVLSRQYGSEGRFTFTSHTPGDHQICLHSNSTRMALFAGGK 128

  Fly   119 KTVFFELIVEREGEELQGDTQWNEADELTGLSRDEYYDMKVQDIMDFIGRIRLQLTKARQLQDVL 183
            ..|..::.|   ||......:....|:||.|      .::.:.::|       |:.:.::.||..
  Rat   129 LRVHLDIQV---GEHANNYPEIAAKDKLTEL------QLRARQLLD-------QVEQIQKEQDYQ 177

  Fly   184 RSHEARDRNLAESNFQKVNHWSMVQISAMIGVGLIQVFMLRSIF 227
            |..|.|.|..:||..|:|..||:.|...:|..|:.|:..|:|.|
  Rat   178 RYREERFRLTSESTNQRVLWWSIAQTVILILTGIWQMRHLKSFF 221

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
opm	NP_572994.1	EMP24_GP25L	33..227	CDD:279450	48/210 (23%)
Tmed4	XP_006251506.1	EMP24_GP25L	29..222	CDD:279450	49/219 (22%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910