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Protein Alignment opm and Tmed7

DIOPT Version :9

Sequence 1:	NP_572994.1	Gene:	opm / 32435	FlyBaseID:	FBgn0264389	Length:	242	Species:	Drosophila melanogaster
Sequence 2:	NP_001099228.1	Gene:	Tmed7 / 252889	RGDID:	727954	Length:	226	Species:	Rattus norvegicus

Alignment Length:	225	Identity:	67/225 - (29%)
Similarity:	103/225 - (45%)	Gaps:	20/225 - (8%)

- Green bases have known domain annotations that are detailed below.

  Fly     5 WLGMPGLVLLLSIAALLLGVQDAEAYDKEMTVYVDAGKTECLYHSVRQGETIDFEYQVIDGGHGD 69
            |....|......:|.|||.:....:...|:|..:.....:|.|..:.||.....|:|||.|||.|
  Rat    10 WAAAAGRWSCRLLALLLLLLLPGPSGGSEITFELPDNAKQCFYEDITQGTKCTLEFQVITGGHYD 74

  Fly    70 LDISFTLLDPIGLVIVSDFKKPENVHRHEVAKEGDYRFCFDNSFSMFNRKTVFFELIVEREGEEL 134
            :|.  .|.||.|.|:..:.||..:......:|.|.|:|||.|.||.|..|||:|:..|   ||:.
  Rat    75 VDC--RLEDPDGKVLYKEMKKQYDSFTFTASKNGTYKFCFSNEFSTFTHKTVYFDFQV---GEDP 134

  Fly   135 QGDTQWNEADELTGL-SRDEYYDMKVQDIMDFIGRIRLQLTKARQLQDVLRSHEARDRNLAESNF 198
            ......|....||.: |........::.::|:....||:              ||:.|:.||...
  Rat   135 PLFPSENRVSALTQMESACVSIHEALKSVIDYQTHFRLR--------------EAQGRSRAEDLN 185

  Fly   199 QKVNHWSMVQISAMIGVGLIQVFMLRSIFA 228
            .:|.:||:.:...::.|.:.|||:|:|.|:
  Rat   186 TRVAYWSVGEALILLVVSIGQVFLLKSFFS 215

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.