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Protein Alignment opm and Tmed1

DIOPT Version :9

Sequence 1:	NP_572994.1	Gene:	opm / 32435	FlyBaseID:	FBgn0264389	Length:	242	Species:	Drosophila melanogaster
Sequence 2:	NP_034874.2	Gene:	Tmed1 / 17083	MGIID:	106201	Length:	227	Species:	Mus musculus

Alignment Length:	230	Identity:	90/230 - (39%)
Similarity:	135/230 - (58%)	Gaps:	26/230 - (11%)

- Green bases have known domain annotations that are detailed below.

  Fly     3 AIWLGMPGLVLLLSIAALLLGVQDA---EAYDKEMTVYVDAGKTECLYHSVRQGETIDFEYQVID 64
            |:||.:|.           :||.:|   ...|.|.|..:.||:.:|.|.|.....:::.|||||
Mouse    11 ALWLLLPA-----------VGVGEAGPPPIQDGEFTFLLPAGRKQCFYQSAPANASLETEYQVI- 63

  Fly    65 GGHGDLDISFTLLDPIGLVIVSDFKKPENVHRHEVAKEGDYRFCFDNSFSMFNRKTVFFELIVE- 128
            ||.| ||:.|||..|.|:::||:.:|.:.||..|..:.||||.|||||||..:.|.||||||.:
Mouse    64 GGAG-LDVDFTLESPQGVLLVSESRKADGVHTVEPTEAGDYRLCFDNSFSTISEKLVFFELIFDS 127

  Fly   129 -REGEELQGDTQWNEADELTGLSRDEYYDMKVQDIMDFIGRIRLQLTKARQLQDVLRSHEARDRN 192
             ::.||::|   |.||.|     .:|..|:|::||.:.|..:|.:|.::.|:..:||:.||||||
Mouse   128 FQDEEEVEG---WAEAVE-----PEEMLDVKMEDIKESIETMRTRLERSIQMLTLLRAFEARDRN 184

  Fly   193 LAESNFQKVNHWSMVQISAMIGVGLIQVFMLRSIF 227
            |.|.|.::||.||...::.::.|.::||..|:..|
Mouse   185 LQEDNLERVNFWSAANVAVLLLVAVLQVCTLKRFF 219

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.