DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eag and SKOR

DIOPT Version :9

Sequence 1:NP_001036275.1 Gene:eag / 32428 FlyBaseID:FBgn0000535 Length:1270 Species:Drosophila melanogaster
Sequence 2:NP_186934.1 Gene:SKOR / 821052 AraportID:AT3G02850 Length:828 Species:Arabidopsis thaliana


Alignment Length:750 Identity:158/750 - (21%)
Similarity:283/750 - (37%) Gaps:193/750 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   235 FKAIWDWVILCLTFYTAIMVPYNVAFKNKTSEDVSLLVVDSIVDVIFFIDIVLNFHTTFVGPGGE 299
            :|| |...||....|::...|....|.....|  :|.::|....:.|.:||||.|...:      
plant    82 YKA-WTMFILIWALYSSFFTPLEFGFFRGLPE--NLFILDIAGQIAFLVDIVLTFFVAY------ 137

  Fly   300 VVSDPKVIRM---------NYLKSWFIIDLLSCLPYD-VFNAFDRDEDGIGSLFSALKVVRLLRL 354
              .|.:..||         .||||.||||||:|:|:| ::.|....|:     ...|.::||.|:
plant   138 --RDSRTYRMIYKRSSIALRYLKSTFIIDLLACMPWDIIYKAAGEKEE-----VRYLLLIRLYRV 195

  Fly   355 GRVV---RKLDR--YLEYGAAMLILLLCFYMLVAHWLACIWYSIGRSDADNGIQYSWLWKLANVT 414
            .||:   .|:::  .:.|....::.|:...:...|..|||:|.:..:...:...|:|   :.::.
plant   196 HRVILFFHKMEKDIRINYLFTRIVKLIFVELYCTHTAACIFYYLATTLPASQEGYTW---IGSLK 257

  Fly   415 QSPYSY-------IWSNDTGPELVNGPSRKSMYVTALYFTMTCMTSVGFGNVAAETDNEKVFTIC 472
            ...|||       :|:.               |.|::||.:..|.:||:|::.|....|.:|.:.
plant   258 LGDYSYSKFREIDLWTR---------------YTTSMYFAVVTMATVGYGDIHAVNMREMIFAMV 307

  Fly   473 MMIIAALLYATIFGHVTTIIQQMTSATAKYHDMLNNVREFMKLHEVPKALSERVMDYVVSTWAMT 537
            .:....:|.|.:.|::|.:|.: .|.|.::.|.:.::..:|..:::.:.:..::..::...:..:
plant   308 YISFDMILGAYLIGNMTALIVK-GSKTERFRDKMADIMRYMNRNKLGRNIRGQITGHLRLQYESS 371

  Fly   538 KGLDTE-KVLNYCPKDMKADICVHLNRKVFNEHPAFRLASDGCLRALAMHFMMSHSAPGDLLYHT 601
            .   || .||...|..::|.|...|......:.|.||..|...:..:.:........||:::...
plant   372 Y---TEAAVLQDIPVSIRAKIAQTLYLPYIEKVPLFRGCSSEFINQIVIRLHEEFFLPGEVIMEQ 433

  Fly   602 GESIDSLCFIVTGSLEVI-----QDDEVVAILGKGDVFGD--------QFWKDSAVGQSAANVRA 653
            |..:|.|.|:..|.||.|     ..:|:||:|.....||:        |.:          .||.
plant   434 GSVVDQLYFVCHGVLEEIGITKDGSEEIVAVLQPDHSFGEISILCNIPQPY----------TVRV 488

  Fly   654 LTYCDLHAIKRDKLLEVLDFYSAFANSFARNLV--LTYNLRHRLIFRKVADV-----KREKELAE 711
            ...|.:..:.:...:.:|:.:.........||:  ...|:|   |.:..:|:     |:|.|||.
plant   489 AELCRILRLDKQSFMNILEIFFHDGRRILNNLLEGKESNVR---IKQLESDITFHISKQEAELAL 550

  Fly   712 RRKNEP------QL---------PQNQD-------HLVR------------------KIFSKFRR 736
            :..:..      ||         |...|       ||..                  .|..|...
plant   551 KLNSAAFYGDLYQLKSLIRAGGDPNKTDYDGRSPLHLAASRGYEDITLYLIQESVDVNIKDKLGS 615

  Fly   737 TPQVQA---------------GSKELVGGSGQ---SDVEKGDGEVERTKLPAKLTLTEDARILST 783
            ||.::|               |:...:..:|.   :.|.|||.:..:             |:||.
plant   616 TPLLEAIKNGNDRVAALLVKEGATLNIENAGTFLCTVVAKGDSDFLK-------------RLLSN 667

  Fly   784 AAAPSPSP----SP---SPSSG---------PPSARSTRASKWGRLLGSSSVDSASDTSAKVAVS 832
            ...|:...    :|   :.|.|         ..||......:|    |::.:|.|.....|:.: 
plant   668 GIDPNSKDYDHRTPLHVAASEGFYVLAIQLVEASANVLAKDRW----GNTPLDEALGCGNKMLI- 727

  Fly   833 RSLSARESLRESTAQARQSSTSSSNGGQGNKVFPK 867
                   .|.|....::.||..|.:....:||:.|
plant   728 -------KLLEDAKNSQISSFPSGSKEPKDKVYKK 755

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eagNP_001036275.1 PAS_9 28..155 CDD:290162
PAS 40..153 CDD:238075
Ion_trans 254..499 CDD:278921 66/266 (25%)
Ion_trans_2 <440..494 CDD:285168 16/53 (30%)
Crp 565..>702 CDD:223736 30/151 (20%)
CAP_ED 571..682 CDD:237999 24/123 (20%)
SKORNP_186934.1 PLN03192 70..827 CDD:215625 157/749 (21%)
ANK repeat 580..611 CDD:293786 3/30 (10%)
ANK repeat 613..644 CDD:293786 4/30 (13%)
ANK repeat 677..708 CDD:293786 5/30 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 111 1.000 Domainoid score I2073
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm987
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X71
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

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