DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eag and che-6

DIOPT Version :9

Sequence 1:NP_001036275.1 Gene:eag / 32428 FlyBaseID:FBgn0000535 Length:1270 Species:Drosophila melanogaster
Sequence 2:NP_001343628.1 Gene:che-6 / 182823 WormBaseID:WBGene00000487 Length:655 Species:Caenorhabditis elegans


Alignment Length:552 Identity:120/552 - (21%)
Similarity:221/552 - (40%) Gaps:104/552 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   204 AHMMSLSADIMPQYRQEAPKTPPHILLHYCAFKAIWDWVILCLTFYTAIMVPYNVAFKNKTSEDV 268
            |.::.:.|||..||                    .|:|:.|            ||.|        
 Worm    85 AMVIFIFADIKTQY--------------------FWNWIFL------------NVMF-------- 109

  Fly   269 SLLVVDSIVDVIFFIDIVLNFHTTFVGPGGEVVSDPKVIRMNYL--KSWFIIDLLSCLPYDVFNA 331
                     |::|.:||.:....|::.. ||.|.:.|.:|.||.  |.....|:...||.|....
 Worm   110 ---------DMVFIVDIFVQSRLTYLHE-GEEVKNTKKLRKNYFFQKLKVANDIFCLLPLDFLLF 164

  Fly   332 FDRDEDGIGSLFSALKVVRLLRLGRVVRKLDRYLEYGAAMLILLLCFYMLVA-HWLACIWYSIG- 394
            ||   |.: ||...:::|:::||...|::..:...:..|..|:||....:|. ||.||:::... 
 Worm   165 FD---DSM-SLVRTIRIVKVIRLMDFVQRTQQQTTFPRAFKIILLAVSCIVLFHWNACLYFLFSL 225

  Fly   395 ------RSDADNGIQYSWLWKLANVTQSPY--SYIW-SNDTGPEL----VNGPSRKSM------- 439
                  .|..:.|..|..:::....|...|  ...| ..|....|    |....:|.|       
 Worm   226 YEGITEESQTEFGFSYYKVFEPVFPTCQAYYDENCWFGEDIDHTLDLDDVRDSYKKEMAEYWKDK 290

  Fly   440 ------------YVTALYFTMTCMTSVGFGNVAAETDNEKVFTICMMIIAALLYATIFGHVTTII 492
                        |..::|::...:|:.| ......|.::....:...:|..|::|||.|.|.:::
 Worm   291 HYRWTTGNFSREYSMSIYWSALTITTCG-QQPWPSTSSQNSLEVFDTLIGVLVFATIIGSVGSVV 354

  Fly   493 QQMTSATAKYHDMLNNVREFMKLHEVPKALSERVMDYVVSTWAMTKGLDTEKVLNYCPKDMKADI 557
            .||:....::..|::.::.:||..||..|:.||.:...:...|..:..|.|.:|:..|..::|:|
 Worm   355 TQMSQTVNEFRQMMDGIKFYMKYREVNSAIQERALSCFMYLMAHNQLDDEEGILSLLPPRLQANI 419

  Fly   558 CVHLNRKVFNEHPAFRLASDGCLRALAMHFMMSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDD 622
            ..:|:.:.......|.|.....:..:.:.......:|.|.|....|....|..:..|.|.||.||
 Worm   420 AANLHMETLQNIQIFALCESRFMHEVVLLVKQQVFSPNDYLCRKNEKAKELFIVKKGKLRVIDDD 484

  Fly   623 --EVVAILGKGDVFGD---QFWKDSAVG-QSAANVRALTYCDLHAIKRDKLLEVL-----DFYSA 676
              |.:..|.:|..||:   .:.|.:.:| :...:::::.:.|::.:.||.:..:|     ::.:.
 Worm   485 TGEEMGELTEGATFGELSIVYVKGNLLGTRRCCSLQSVGFSDIYVLYRDDVSRLLQEFPQEYKTI 549

  Fly   677 FANSFARNLVLTYNLRHRLIFRKVADVKREKE 708
            ..|  ||||:.:..|.......::.|....:|
 Worm   550 VMN--ARNLLHSRGLLETTELGEMCDPSDHEE 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eagNP_001036275.1 PAS_9 28..155 CDD:290162
PAS 40..153 CDD:238075
Ion_trans 254..499 CDD:278921 63/280 (23%)
Ion_trans_2 <440..494 CDD:285168 12/53 (23%)
Crp 565..>702 CDD:223736 30/147 (20%)
CAP_ED 571..682 CDD:237999 25/121 (21%)
che-6NP_001343628.1 Ion_trans 68..>245 CDD:366146 50/213 (23%)
PLN03192 <303..>581 CDD:215625 62/280 (22%)
CAP_ED 433..544 CDD:237999 24/110 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158446
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.