DRSC/TRiP Functional Genomics Resources

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Protein Alignment hbs1l and eEF1alpha1

DIOPT Version :9

Sequence 1:NP_001295477.1 Gene:hbs1l / 324267 ZFINID:ZDB-GENE-030131-2987 Length:682 Species:Danio rerio
Sequence 2:NP_001286321.1 Gene:eEF1alpha1 / 36271 FlyBaseID:FBgn0284245 Length:463 Species:Drosophila melanogaster


Alignment Length:434 Identity:172/434 - (39%)
Similarity:257/434 - (59%) Gaps:12/434 - (2%)


- Green bases have known domain annotations that are detailed below.


Zfish   259 LNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQEAKKAGKASFAYAWVLDETGEERDRGVT 323
            :|:|||||||:||||..|||:|..|.::|||:.|:|:||::.||.||.||||||:...||:||:|
  Fly     8 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGIT 72

Zfish   324 MDVGMTKFETDSKVVTLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFEAGGQTREHA 388
            :|:.:.||||....||::|||||:|||.|||||.:|||.|||:|.|..||||||....|||||||
  Fly    73 IDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHA 137

Zfish   389 LLVRSLGVTQLAVAVNKMD--QVNWQQERFQEIISKLGHFLKQAGFKDSDVFYVPTSGLSGENLT 451
            ||..:|||.||.|.|||||  :..:.:.|::||..::..::|:.|:..:.|.:||.||..|:|:.
  Fly   138 LLAFTLGVKQLIVGVNKMDSSEPPYSEARYEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNML 202

Zfish   452 TKS---------KVADLTAWYTGPCLVEQIDAFKPPQRSVEKPFRLCVSDVFKDQGSGFCVTGKI 507
            ..|         ||........|..|::.:||..||.|..:|..||.:.||:|..|.|....|::
  Fly   203 EPSTNMPWFKGWKVERKEGNADGKTLIDALDAILPPARPTDKALRLPLQDVYKIGGIGTVPVGRV 267

Zfish   508 EAGYIQTGDKVLAMPPNETCTVKGISLHDEALDWAAAGDHVSLTVTGMDIIKINVGCVFCDPK-E 571
            |.|.::.|..|:..|.|.|..||.:.:|.|||..|..||:|...|..:.:.::..|.|..|.| .
  Fly   268 ETGVLKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKAN 332

Zfish   572 PIRACTRFRARILLFNIELPITQGFPVLLHYQTVSEPATIRKLVSVLHKSSGEVLKKKPKCLSKG 636
            |.:....|.|::::.|....|..|:..:|...|........::...:.:.||:..::.||.:..|
  Fly   333 PPKGAADFTAQVIVLNHPGQIANGYTPVLDCHTAHIACKFAEIKEKVDRRSGKTTEENPKFIKSG 397

Zfish   637 QNAVVEIQTQRPVAMELYKDYKELGRFMLRYVGSTIAAGVVTEI 680
            ..|:|.:...:|:.:|.::::..||||.:|.:..|:|.||:..:
  Fly   398 DAAIVNLVPSKPLCVEAFQEFPPLGRFAVRDMRQTVAVGVIKAV 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbs1lNP_001295477.1 HBS1_N <78..130 CDD:286079
TEF1 254..682 CDD:227581 172/434 (40%)
EF1_alpha 260..479 CDD:206670 113/229 (49%)
HBS1-like_II 485..568 CDD:293912 28/82 (34%)
HBS1_C_III 572..680 CDD:294008 26/107 (24%)
eEF1alpha1NP_001286321.1 PTZ00141 1..457 CDD:185474 172/434 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5256
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1150082at2759
OrthoFinder 1 1.000 - - FOG0000314
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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