DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pdgy and FAT1

DIOPT Version :9

Sequence 1:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_009597.2 Gene:FAT1 / 852329 SGDID:S000000245 Length:669 Species:Saccharomyces cerevisiae


Alignment Length:542 Identity:126/542 - (23%)
Similarity:210/542 - (38%) Gaps:105/542 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 LQTKFNLQKPDVLAICLPNLPEY-----PIATLGAIEAGLTVTTVNPVYTPDEIARQLTFSGAK- 177
            |...:|:|..|.:||...|.|.:     .:..:|||.|.|...|..   ||  :...|..|... 
Yeast   128 LHFDYNVQAGDYVAIDCTNKPLFVFLWLSLWNIGAIPAFLNYNTKG---TP--LVHSLKISNITQ 187

  Fly   178 -FLVGTVSGFATLSQASKLVGRQIPIAVVRTSAEE---ALPEGAIDF-------SELTSTQN--- 228
             |:....|.               ||   |.|.||   |||:..:::       .||.::|:   
Yeast   188 VFIDPDASN---------------PI---RESEEEIKNALPDVKLNYLEEQDLMHELLNSQSPEF 234

  Fly   229 VRYEDLKAPKEASADDMVFLPFSSGTTGLPKGVMLSHNNITSNCEQVQASLPLDLMGPQNTLPGV 293
            ::.::::.|...:......|.::||||||||..::|....:..|:.....|.   |..::|:...
Yeast   235 LQQDNVRTPLGLTDFKPSMLIYTSGTTGLPKSAIMSWRKSSVGCQVFGHVLH---MTNESTVFTA 296

  Fly   294 LPFFHIYGLTVVMLSKLGQGCRLATMPCFKPDDFMRSLDKYQGSILNLVPPIALFMINHPKLTQE 358
            :|.||.....:...:.|..|..||....|....|.:.:.....:.:..|..:..::::.|....|
Yeast   297 MPLFHSTAALLGACAILSHGGCLALSHKFSASTFWKQVYLTGATHIQYVGEVCRYLLHTPISKYE 361

  Fly   359 TAPHLKVVM-SGAAPIGQHDV-ERFLNKFPNTVFKQGYGMTEASPVVLLTPEGN------KVYAS 415
            ....:||.. :|..|    |: :.|..:|...|..:.|..|||........:|:      :.|.:
Yeast   362 KMHKVKVAYGNGLRP----DIWQDFRKRFNIEVIGEFYAATEAPFATTTFQKGDFGIGACRNYGT 422

  Fly   416 TGVLPASTEAKIVPLDGSD-------AKG---VGP-RTTGELCVR-----GPQV-MAGYLNNDEA 463
            ......|.:..:|.:|.:|       :||   |.| ...||:.:|     .|:. ..|||.|.:.
Yeast   423 IIQWFLSFQQTLVRMDPNDDSVIYRNSKGFCEVAPVGEPGEMLMRIFFPKKPETSFQGYLGNAKE 487

  Fly   464 NQV-----TFYPGN-WLRSGDVAFYDEDGLFYITDRMKELIKVKGFQVPPAELEAVL--RDHPKI 520
            .:.     .|..|: |.|.||:...||.||:|..|||.:..:.|...|...|:|..|  .:..:.
Yeast   488 TKSKVVRDVFRRGDAWYRCGDLLKADEYGLWYFLDRMGDTFRWKSENVSTTEVEDQLTASNKEQY 552

  Fly   521 LEAAVFGIP-HEFNGEAPRAIVVLRQ------------GEKASAEEISAYVAERVAHYKKLEGGV 572
            .:..|.||. .::.|.|..|::.|..            .:..|...:.:|.....         |
Yeast   553 AQVLVVGIKVPKYEGRAGFAVIKLTDNSLDITAKTKLLNDSLSRLNLPSYAMPLF---------V 608

  Fly   573 IFVDEVPKNPTGKILRRELKEK 594
            .||||:......|||::..:|:
Yeast   609 KFVDEIKMTDNHKILKKVYREQ 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 126/542 (23%)
Firefly_Luc_like 99..587 CDD:213279 123/533 (23%)
FAT1NP_009597.2 FATP_chFAT1_like 107..634 CDD:341260 126/542 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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