DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pdgy and ACS2

DIOPT Version :9

Sequence 1:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_013254.1 Gene:ACS2 / 850846 SGDID:S000004143 Length:683 Species:Saccharomyces cerevisiae


Alignment Length:671 Identity:150/671 - (22%)
Similarity:268/671 - (39%) Gaps:184/671 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 QSVSETDKFLHYSPEDGYYKTSPFDPVTIPNVPLHEYVWRDFKKWERRTAAVCVITDRQ------ 102
            ||::|.:||.....::..:..:|:..|...::...:..|  |...:...:..||  ||.      
Yeast    46 QSINEPEKFFDKMAKEYLHWDAPYTKVQSGSLNNGDVAW--FLNGKLNASYNCV--DRHAFANPD 106

  Fly   103 ----------------YTFAQMRDASAAFAVRLQTKFNLQKPDVLAICLPNLPEYPIATLGAIEA 151
                            .||.::....:..|..|:: :.::|.|.:||.||.:||..||.|.....
Yeast   107 KPALIYEADDESDNKIITFGELLRKVSQIAGVLKS-WGVKKGDTVAIYLPMIPEAVIAMLAVARI 170

  Fly   152 GLTVTTVNPVYTPDEIARQLTFSGAKFLVGTVSGFATLSQASKLVGRQIPIAVVRTSAEEALPEG 216
            |...:.|...::...:..::..:.:|.::....|        |..|:.|       :.::.:.||
Yeast   171 GAIHSVVFAGFSAGSLKDRVVDANSKVVITCDEG--------KRGGKTI-------NTKKIVDEG 220

  Fly   217 --AIDF------SELTSTQNVRYEDLKA------------------PKEASADDMVFLPFSSGTT 255
              .:|.      .:.|.|:.:   .:||                  |....|:|.:||.::||:|
Yeast   221 LNGVDLVSRILVFQRTGTEGI---PMKAGRDYWWHEEAAKQRTYLPPVSCDAEDPLFLLYTSGST 282

  Fly   256 GLPKGVMLSHNNITSNCEQVQASL---------PLDLM---GPQNTLPGVLPFFHIYG-LTVVML 307
            |.||||:  |   |:....:.|:|         |.|::   |....:.|  ..:.:|| ||:...
Yeast   283 GSPKGVV--H---TTGGYLLGAALTTRYVFDIHPEDVLFTAGDVGWITG--HTYALYGPLTLGTA 340

  Fly   308 SKLGQGCRLATMPCFKPD--DFMRSLDKYQGSILNLVPPIALFMI---NHPKLTQETAPHLKVVM 367
            |.:     ..:.|.: ||  .:.|.:.:::.:.. .|.|.||.:|   ...::.:.....|:|:.
Yeast   341 SII-----FESTPAY-PDYGRYWRIIQRHKATHF-YVAPTALRLIKRVGEAEIAKYDTSSLRVLG 398

  Fly   368 SGAAPIG------QHDVERFLNKFPNTVFKQGYGMTEASPVVLLTPEGNKVYAS-TGVLPASTEA 425
            |...||.      .|  |:..||  |.|.......||:         |:.:.|. .|.:|....:
Yeast   399 SVGEPISPDLWEWYH--EKVGNK--NCVICDTMWQTES---------GSHLIAPLAGAVPTKPGS 450

  Fly   426 KIVP----------------LDGSDAKGVGPRTTGELCVRG--PQVMAGYLNNDEANQVTF---Y 469
            ..||                |:|:|.:||       |.|:.  |.:.....|:.:....|:   |
Yeast   451 ATVPFFGINACIIDPVTGVELEGNDVEGV-------LAVKSPWPSMARSVWNHHDRYMDTYLKPY 508

  Fly   470 PGNWLRSGDVAFYDEDGLFYITDRMKELIKVKGFQVPPAELEAVLRDHPKILEAAVFGIPHEFNG 534
            ||::. :||.|..|.||.::|..|:.:::.|.|.::..:|:||.:.:|..:.||||.|||.|..|
Yeast   509 PGHYF-TGDGAGRDHDGYYWIRGRVDDVVNVSGHRLSTSEIEASISNHENVSEAAVVGIPDELTG 572

  Fly   535 EAPRAIVVLRQG------EKASAE-----------------EISAYVAERVAHYKKLEGGVIFVD 576
            :...|.|.|:.|      .:..||                 ||..:.:.:.         :|.|.
Yeast   573 QTVVAYVSLKDGYLQNNATEGDAEHITPDNLRRELILQVRGEIGPFASPKT---------IILVR 628

  Fly   577 EVPKNPTGKILRRELKEKFSD 597
            ::|:..:|||:||.|::..|:
Yeast   629 DLPRTRSGKIMRRVLRKVASN 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 142/634 (22%)
Firefly_Luc_like 99..587 CDD:213279 134/604 (22%)
ACS2NP_013254.1 ACS 38..662 CDD:341270 150/671 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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