DRSC/TRiP Functional Genomics Resources

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Protein Alignment pdgy and 4CL1

DIOPT Version :9

Sequence 1:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_175579.1 Gene:4CL1 / 841593 AraportID:AT1G51680 Length:561 Species:Arabidopsis thaliana


Alignment Length:568 Identity:199/568 - (35%)
Similarity:307/568 - (54%) Gaps:28/568 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 QSVSET-DKFLHYSPEDGYYKTSPFDPVTIPN-VPLHEYVWRDFKKWERRTAAVCVITDRQYTFA 106
            |:||:. :|..:.:..|..:: |....:.||| :.||:|::::..::..:...:...|...||::
plant     6 QAVSQVMEKQSNNNNSDVIFR-SKLPDIYIPNHLSLHDYIFQNISEFATKPCLINGPTGHVYTYS 69

  Fly   107 QMRDASAAFAVRLQTKFNLQKPDVLAICLPNLPEYPIATLGAIEAGLTVTTVNPVYTPDEIARQL 171
            .:...|...|.... |..:.:.||:.:.|||.||:.::.|.|...|.|.|..||.:||.|||:|.
plant    70 DVHVISRQIAANFH-KLGVNQNDVVMLLLPNCPEFVLSFLAASFRGATATAANPFFTPAEIAKQA 133

  Fly   172 TFSGAKFLVGTVSGFATLSQASKLVGRQ----IPIAVVRTSAEEALPEGAIDFSELTSTQNVRYE 232
            ..|..|.::      .......|:...|    :.|..:..:....:|||.:.|:|||.:.....|
plant   134 KASNTKLII------TEARYVDKIKPLQNDDGVVIVCIDDNESVPIPEGCLRFTELTQSTTEASE 192

  Fly   233 DLKAPKEASADDMVFLPFSSGTTGLPKGVMLSHNN-ITSNCEQVQASLPLDLMGPQNTLPGVLPF 296
            .:.: .|.|.||:|.||:|||||||||||||:|.. :||..:||....|.......:.:..|||.
plant   193 VIDS-VEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPM 256

  Fly   297 FHIYGLTVVMLSKLGQGCRLATMPCFKPDDFMRSLDKYQGSILNLVPPIALFMINHPKLTQETAP 361
            ||||.|..:||..|..|..:..||.|:.:..:..:.:.:.::..:||||.|.:....:..:....
plant   257 FHIYALNSIMLCGLRVGAAILIMPKFEINLLLELIQRCKVTVAPMVPPIVLAIAKSSETEKYDLS 321

  Fly   362 HLKVVMSGAAPIGQHDVERFLN-KFPNTVFKQGYGMTEASPVVLLT------PEGNKVYASTGVL 419
            .::||.|||||:|: ::|..:| ||||....||||||||.||:.::      |...| ..:.|.:
plant   322 SIRVVKSGAAPLGK-ELEDAVNAKFPNAKLGQGYGMTEAGPVLAMSLGFAKEPFPVK-SGACGTV 384

  Fly   420 PASTEAKIVPLDGSDAKGVGPRTTGELCVRGPQVMAGYLNNDEANQVTFYPGNWLRSGDVAFYDE 484
            ..:.|.|||..|..|:  :.....||:|:||.|:|.|||||..|...|.....||.:||:...|:
plant   385 VRNAEMKIVDPDTGDS--LSRNQPGEICIRGHQIMKGYLNNPAATAETIDKDGWLHTGDIGLIDD 447

  Fly   485 DGLFYITDRMKELIKVKGFQVPPAELEAVLRDHPKILEAAVFGIPHEFNGEAPRAIVVLRQGEKA 549
            |...:|.||:|||||.|||||.||||||:|..||.|.:.||..:..|..||.|.|.||..:..:.
plant   448 DDELFIVDRLKELIKYKGFQVAPAELEALLIGHPDITDVAVVAMKEEAAGEVPVAFVVKSKDSEL 512

  Fly   550 SAEEISAYVAERVAHYKKLEGGVIFVDEVPKNPTGKILRRELKEKFSD 597
            |.:::..:|:::|..||:: ..|.|.:.:||.|:|||||::|:.|.::
plant   513 SEDDVKQFVSKQVVFYKRI-NKVFFTESIPKAPSGKILRKDLRAKLAN 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 189/529 (36%)
Firefly_Luc_like 99..587 CDD:213279 182/499 (36%)
4CL1NP_175579.1 PLN02246 16..560 CDD:215137 195/558 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 70 1.000 Domainoid score I3393
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H80284
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54045
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 1 1.000 - - FOG0000951
OrthoInspector 1 1.000 - - otm2758
orthoMCL 1 0.900 - - OOG6_100107
Panther 1 1.100 - - O PTHR24096
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X154
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.790

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