DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pdgy and AT1G20490

DIOPT Version :9

Sequence 1:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_001322801.1 Gene:AT1G20490 / 838637 AraportID:AT1G20490 Length:447 Species:Arabidopsis thaliana


Alignment Length:468 Identity:131/468 - (27%)
Similarity:204/468 - (43%) Gaps:65/468 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 DKFLHYSPEDGYYKT-----SPFDPVTI-PNVPLHEYVWRDFKKWERRTAAVCVITDRQYTFAQM 108
            ::.|...|..|:.|:     |..:|:.: ||..|....:...:.....||.:...|..:.||:.:
plant     5 ERDLIVDPRSGFCKSNSTFYSKRNPLCLPPNPSLDVTTFISSQPQRGTTAFIDASTGHRLTFSDL 69

  Fly   109 RDASAAFAVRLQTKFNLQKPDVLAICLPNLPEYPIATLGAIEAGLTVTTVNPVYTPDEIARQLTF 173
            .......|..|..:..:::.||:.|..||....|:..|..:..|..|||.|.:.|..||::|:..
plant    70 WRVVDRVADCLYHEVGIRRGDVVLILSPNSIYIPVVCLSVMSLGAVVTTANTLNTSGEISKQIAQ 134

  Fly   174 SGAKFLVGTVSGFATLSQASKLVGRQIPIAVVRTSAEEALPEGAID----------FSEL----T 224
            |....:      |.|...|.||..   .|:||.|..|:   |..::          .||:    |
plant   135 SNPTLV------FTTSQLAPKLAA---AISVVLTDEED---EKRVELTSGVRVVGILSEMMKKET 187

  Fly   225 STQNVRYEDLKAPKEASADDMVFLPFSSGTTGLPKGVMLSHNNITSNCEQVQASLPLDLMGPQNT 289
            |.|.||       ...:.||...:.:||||||..|||:.||.|:|:    ..|....|.......
plant   188 SGQRVR-------DRVNQDDTAMMLYSSGTTGTSKGVISSHRNLTA----YVAKYIDDKWKRDEI 241

  Fly   290 LPGVLPFFHIYGLTVVMLSKLGQGCRLATMPCFKPDDFMRSLDKYQGSILNLVPPIALFMINHP- 353
            ....:|.||.:||....:..:..|..:..:..|..||.|::::||:.:||:|.||:.:.|||.. 
plant   242 FVCTVPMFHSFGLLAFAMGSVASGSTVVILRRFGLDDMMQAVEKYKATILSLAPPVLVAMINGAD 306

  Fly   354 ------KLTQETAPHLKVVMSGAAPIGQHDVERFLNKFPNTVFKQGYGMTEA--SPVVLLTPEGN 410
                  .||.     |:.|..|.||:.:..::.||.|:|.....|||.:||:  |.....:.|.:
plant   307 QLKAKYDLTS-----LRKVRCGGAPLSKEVMDSFLEKYPTVNIFQGYALTESHGSGASTESVEES 366

  Fly   411 KVYASTGVLPASTEAKIVPLDGSDAKGVGPRTTGELCVRGPQVMAGYLNNDEANQVTFYPGNWLR 475
            ..|.:.|:|.:..||:||  |....:.:|....|||.::||.:..||..|:||...|.....||:
plant   367 LKYGAVGLLSSGIEARIV--DPDTGRVMGVNQPGELWLKGPSISKGYFGNEEATNETINLEGWLK 429

  Fly   476 ------SGDVAFY 482
                  |..:.||
plant   430 LEISAISMKMGFY 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 123/435 (28%)
Firefly_Luc_like 99..587 CDD:213279 120/413 (29%)
AT1G20490NP_001322801.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54045
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2758
orthoMCL 1 0.900 - - OOG6_100107
Panther 1 1.100 - - O PTHR24096
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X154
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.780

Return to query results.
Submit another query.