DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pdgy and acsf2

DIOPT Version :9

Sequence 1:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_001038884.2 Gene:acsf2 / 751707 ZFINID:ZDB-GENE-060825-7 Length:606 Species:Danio rerio


Alignment Length:564 Identity:150/564 - (26%)
Similarity:240/564 - (42%) Gaps:96/564 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 KKWERRTAAVCVITDRQYTFAQM-RDASAAFAVRLQTKFNLQKPDVLAICLPNLPEYPIATLGAI 149
            :::..|.|.|.|....:.|||:. :|...|.|..|..  .|::.|.|.:..||:.|:.:......
Zfish    77 ERYPDREAMVFVQDGIRKTFAEFYQDVEKAAAGLLAA--GLKRGDRLGMWGPNIYEWVLMQFATA 139

  Fly   150 EAGLTVTTVNPVYTPDEIARQLTFSGAKFLVGTVSGFATLSQAS-------KLVGRQIPIAVVRT 207
            :||:.:..|||.|...|:         :|.:..|...|.:....       .::.:..|      
Zfish   140 KAGIILVAVNPAYQLQEV---------EFALRKVQCNAVVCPTKFKSQHYCDMLKQLCP------ 189

  Fly   208 SAEEALPEGAIDFSELTSTQNVRYEDLKAP------------------------KEASADDMVFL 248
            ..|.|.| |.|..|.|.....|...|.:.|                        |:...||.:.:
Zfish   190 EMETASP-GGIKSSRLPDLHTVIVTDSQQPGSFLLKDLMQAGSSQHYQQLQDLQKKLVCDDPINI 253

  Fly   249 PFSSGTTGLPKGVMLSHNNITSNC------------EQVQASLPLDLMGPQNTLPGVLPFFHIYG 301
            .|:|||||.|||..|||:||.:|.            :.|:..||             :|.:|.:|
Zfish   254 QFTSGTTGKPKGATLSHHNIVNNAYFTGMRIGYNWRKNVRICLP-------------VPLYHCFG 305

  Fly   302 LTVVMLSKLGQGCRLA---TMPCFKPDDF-----MRSLDKYQGSILNLVPPIALFMINHPKLTQE 358
                   .:|.|..:|   |...|....:     :|:::|.:.:.:...|.:.:.|:..|.|.:.
Zfish   306 -------SVGGGVIMALYGTTVIFPSTGYDGRANLRAIEKEKCTFVYGTPTMYIDMLGQPDLAKF 363

  Fly   359 TAPHLKVVMSGAAPIGQHDVERFLNKFPNTVFKQGYGMTEASPVVLL---TPEGNKVYASTGVLP 420
            ....::..::..:|.....:.:.||.........|||.||.|||...   .....:...:.|.:.
Zfish   364 DLSSVRGGIAAGSPCPPEVMRKILNVMGIKEMVIGYGTTENSPVTFCGFPVDSAERKIETVGCIS 428

  Fly   421 ASTEAKIVPLDGSDAKGVGPRTTGELCVRGPQVMAGYLNNDEANQVTFYPGNWLRSGDVAFYDED 485
            ..||||:|  |.:..:.|.....|||.:||..||..|..::|..:.......|.::||:|..|:.
Zfish   429 PHTEAKVV--DPTTGEIVPLGAQGELMIRGYCVMLEYWQDEEKTRECITKDRWYKTGDIASLDQF 491

  Fly   486 GLFYITDRMKELIKVKGFQVPPAELEAVLRDHPKILEAAVFGIPHEFNGEAPRAIVVLRQGEKAS 550
            ....|..|:|:||...|..:.|||:|..|..|||||||.|.|:..|..||...|.:.|::|::.:
Zfish   492 AYCKIEGRIKDLIIRGGENIYPAEIEQFLHTHPKILEAQVVGVKDERMGEEVCACIRLKEGQECT 556

  Fly   551 AEEISAYVAERVAHYKKLEGGVIFVDEVPKNPTGKILRRELKEK 594
            .|||.||...::||| |:...::||.:.|...||||.:.:|:|:
Zfish   557 VEEIKAYCKGKIAHY-KVPRYILFVQDYPLTITGKIQKHKLRER 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 150/564 (27%)
Firefly_Luc_like 99..587 CDD:213279 143/542 (26%)
acsf2NP_001038884.2 PRK08315 53..606 CDD:236236 150/564 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100107
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R434
SonicParanoid 1 1.000 - - X154
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.740

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