DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pdgy and Acsl3

DIOPT Version :9

Sequence 1:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_001028778.2 Gene:Acsl3 / 74205 MGIID:1921455 Length:720 Species:Mus musculus


Alignment Length:593 Identity:138/593 - (23%)
Similarity:233/593 - (39%) Gaps:162/593 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 QKPDV-LAICLPNLPEYPI----------------ATLG--AIEAGLTVTTVNPVYTPDEIARQL 171
            |||.. :||......|:.|                ||||  ||..||..|.|..:.|..|:.:  
Mouse   156 QKPKANIAIFCETRAEWMIAAQACFMYNFQLVTLYATLGGPAIVHGLNETEVTNIITSKELLQ-- 218

  Fly   172 TFSGAKFLVGTVSGFATLSQASKLVGRQIPIAVV--RTSAEEALPEGAIDFSELTSTQ------N 228
                           ..|.....||.|...|..|  :.......|:|.| ...:.:.|      |
Mouse   219 ---------------TKLKDIVSLVPRLRHIITVDGKPPTWSEFPKGVI-VHTMAAVQALGVKAN 267

  Fly   229 VRYEDLKAPKEASADDMVFLPFSSGTTGLPKGVMLSHNNITSNCEQVQASLPLDLMGPQNTLPGV 293
            |   :.||..:....|:..:.::||:||:|||||:||:||.::...:...:|  .:|.::...|.
Mouse   268 V---EKKAHSKPLPSDIAVIMYTSGSTGIPKGVMISHSNIIASITGMARRIP--RLGEEDVYIGY 327

  Fly   294 LPFFHIYGLTVVMLSKLGQGCRLA---------------------------TMPCFKPDDFMRSL 331
            ||..|:..|:..::. |..|||:.                           |:....|:    .:
Mouse   328 LPLAHVLELSAELVC-LSHGCRIGYSSPQTLADQSSKIKKGSKGDTSVLKPTLMAAVPE----IM 387

  Fly   332 DKYQGSILNLVPPIALFMIN------HPKLTQET--------------------APHLKVVMSGA 370
            |:...:::|.|..::.|..|      :.|:.|.:                    ..::::::.|.
Mouse   388 DRIYKNVMNKVNEMSAFQRNLFILAYNYKMEQISKGCSTPLCDRFVFRNVRRLLGGNIRLLLCGG 452

  Fly   371 APIGQHDVERFLNKFPNTVFKQGYGMTEASPVVLLTPEGNKVY-ASTGVLPASTEAKIVPLDGSD 434
            ||:.. ..:||:|........||||:||::....:|    :|: .:||.:.|......:.|...:
Mouse   453 APLSA-TTQRFMNICFCCPVGQGYGLTESTGAGTIT----EVWDYNTGRVGAPLVCCEIKLKNWE 512

  Fly   435 AKGV----GPRTTGELCVRGPQVMAGYLNNDEANQVTFYPG----NWLRSGDVAFYDEDGLFYIT 491
            ..|.    .|...||:.:.|..|..||..|:...:..|:..    .||.:||:..:|.||...|.
Mouse   513 EGGYFNTDKPHPRGEILIGGQNVTMGYYKNEAKTKTDFFEDENGQRWLCTGDIGEFDPDGCLKII 577

  Fly   492 DRMKELIKVK-GFQVPPAELEAVLRDHPKI---------LEAAVFG--IPHEFNGEAPRAIVVL- 543
            ||.|:|:|:: |..|...::||.|::.|.|         ..:.|.|  :|::      :.:..| 
Mouse   578 DRKKDLVKLQAGEYVSLGKVEAALKNLPLIDNICAYANSYHSYVIGFVVPNQ------KELTELA 636

  Fly   544 -RQGEKASAEEI--SAYVAERV----------AHYKKLEGGV-IFVDEVPKNP-TG------KIL 587
             .:|.|.:.||:  |:.:...|          |..:|.|..: |.:...|..| ||      |:.
Mouse   637 RTKGFKGTWEELCNSSEMENEVLKVLSEAAISASLEKFEIPLKIRLSPDPWTPETGLVTDAFKLK 701

  Fly   588 RRELKEKF 595
            |:|||..:
Mouse   702 RKELKTHY 709

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 138/591 (23%)
Firefly_Luc_like 99..587 CDD:213279 134/583 (23%)
Acsl3NP_001028778.2 PLN02387 30..717 CDD:215217 138/593 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839043
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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