DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pdgy and ACSM3

DIOPT Version :9

Sequence 1:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster
Sequence 2:XP_024306135.1 Gene:ACSM3 / 6296 HGNCID:10522 Length:633 Species:Homo sapiens


Alignment Length:563 Identity:132/563 - (23%)
Similarity:231/563 - (41%) Gaps:92/563 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 WRDFKK-----------WERRTAAVCVITDRQYTFAQMRDASAAFAVRLQTKFNLQKPDVLAICL 135
            |.|.:|           |..|..     .:.:::|.::...|..||..|....:||:.|.:.:.|
Human    68 WTDKEKAGKKPSNPAFWWINRNG-----EEMRWSFEELGSLSRKFANILSEACSLQRGDRVILIL 127

  Fly   136 PNLPEYPIATLGAIEAGLTV---TT--------------------VNPVYTP--DEIARQLTFSG 175
            |.:||:.:|.:..:..|..:   ||                    .|.|..|  |.:|.:.....
Human   128 PRVPEWWLANVACLRTGTVLIPGTTQLTQKDILYRLQSSKANCIITNDVLAPAVDAVASKCENLH 192

  Fly   176 AKFLVGTVS--GFATLSQASKL---------VGRQIPIAVVRTSAEEALPEGAIDFSELTSTQNV 229
            :|.:|...|  |:..|.:..|:         |.|.. :....||..:|:      .|.|:|....
Human   193 SKLIVSENSREGWGNLKELMKVFLCHPGWSTVARSW-LTATSTSLVQAI------LSLLSSWDYR 250

  Fly   230 RYEDLKAPKEASADDMVFLPFSSGTTGLPKGVMLSHNNITSNCEQVQASLPLDLMGPQNTLPGVL 294
            ...|.....:...::::.:.|:|||:|.||....:|::..... .|.....|||. |.:.:....
Human   251 HASDSHTCVKTKHNEIMAIFFTSGTSGYPKMTAHTHSSFGLGL-SVNGRFWLDLT-PSDVMWNTS 313

  Fly   295 PFFHIYGLTVVMLSKLGQGCRLAT--MPCFKPDDFMRSLDKYQGSILNLVPPIALFMINHPKLTQ 357
            ...........:.|...||..:.|  :|.|:|...:::|.||..::....|.:...::.: .:|.
Human   314 DTGWAKSAWSSVFSPWIQGACVFTHHLPRFEPTSILQTLSKYPITVFCSAPTVYRMLVQN-DITS 377

  Fly   358 ETAPHLKVVMSGAAPIGQHDVERFLNKFPNTVFKQGYGMTEASPVVLLTP--EGNKVY-ASTGVL 419
            .....||..:|...||.....|::.||....:: :|||.||   .||:..  :|.|:. .|.|..
Human   378 YKFKSLKHCVSAGEPITPDVTEKWRNKTGLDIY-EGYGQTE---TVLICGNFKGMKIKPGSMGKP 438

  Fly   420 PASTEAKIVPLDGSDAKGVGPRTTGELCVRGPQVMAG--------YLNNDEANQVTFYPGNWLRS 476
            ..:.:.|||.::|:   .:.|...|::   |.||:..        |::|......|. .||:..:
Human   439 SPAFDVKIVDVNGN---VLPPGQEGDI---GIQVLPNRPFGLFTHYVDNPSKTASTL-RGNFYIT 496

  Fly   477 GDVAFYDEDGLFYITDRMKELIKVKGFQVPPAELEAVLRDHPKILEAAVFGIPHEFNGEAPRAIV 541
            ||..:.|:||.|:...|..::|...|:::.|.|:|..|.:||.:.|:||...|....||..:|.|
Human   497 GDRGYMDKDGYFWFVARADDVILSSGYRIGPFEVENALNEHPSVAESAVVSSPDPIRGEVVKAFV 561

  Fly   542 VLRQGEKAS-----AEEISAYVAERVAHYK-KLEGGVIFVDEV 578
            ||....|:.     .:||..:|.:..|.|| ..:.|::.:..:
Human   562 VLNPDYKSHDQEQLIKEIQEHVKKTTAPYKYPRKVGILIITNI 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 132/563 (23%)
Firefly_Luc_like 99..587 CDD:213279 127/535 (24%)
ACSM3XP_024306135.1 AFD_class_I 54..596 CDD:327384 131/553 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D333840at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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