DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pdgy and Acsf2

DIOPT Version :9

Sequence 1:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_001030123.1 Gene:Acsf2 / 619561 RGDID:1562656 Length:615 Species:Rattus norvegicus


Alignment Length:548 Identity:150/548 - (27%)
Similarity:246/548 - (44%) Gaps:61/548 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 KKWERRTAAVCVITDRQYTFAQMRD-----ASAAFAVRLQTKFNLQKPDVLAICLPNLPEYPIAT 145
            :::..|.|.|.:..:.:..|||:::     ||...::      .|:|.|.|.:..||...:.:..
  Rat    83 QRFPNREALVIIHENIRLNFAQLKEEVDRAASGLLSI------GLRKGDRLGMWGPNSYAWVLIQ 141

  Fly   146 LGAIEAGLTVTTVNPVYTPDEIARQLTFSGAKFLV-----GTVSGFATL---------SQASKLV 196
            |...:||:.:.:|||.|...|:...|...|.|.:|     .|...:..|         :|...|.
  Rat   142 LATAQAGIILVSVNPAYQASELEYVLRKVGCKGIVFPKQFKTQQYYNILKQVCPELEKAQPGALK 206

  Fly   197 GRQIPIAVVRTSAEEALPEGAIDFSELTST----QN---VRYEDLKAPKEASADDMVFLPFSSGT 254
            ..::|......|.:..|| |.:...|:.:.    ||   :||..    ...|..|.:.:.|:|||
  Rat   207 SERLPDLTTVISVDAPLP-GTLLLDEVVAAGGKEQNLAQLRYHQ----GFLSCYDPINIQFTSGT 266

  Fly   255 TGLPKGVMLSHNNITSNCEQVQASLPLDLMGPQNT-------LPGVLPFFHIYG-LTVVMLSKLG 311
            ||.|||..|||:||.:|...:...|.:    |..|       ||  .|.:|..| :...|:|.:.
  Rat   267 TGNPKGATLSHHNIVNNSNLIGQRLKM----PAKTAEELRMVLP--CPLYHCLGSVGGTMVSVVH 325

  Fly   312 QGCRLATMPCFKPDDFMRSLDKYQGSILNLVPPIALFMINHPKLTQETAPHLK--VVMSGAAPIG 374
            ....|.:.|.|.....:.::.:.:|::|...|.:.:.::|.|..:......::  |:....||  
  Rat   326 GATLLLSSPSFNGKKALEAISREKGTLLYGTPTMFVDILNQPDFSSYDFTTIRGGVIAGSLAP-- 388

  Fly   375 QHDVERFLNKFPNTVFKQGYGMTEASPVVLLT-PEG--NKVYASTGVLPASTEAKIVPLDGSDAK 436
            ...:...::|.........||.||.|||..:. ||.  .:...|.|.:...|||:||.::..:..
  Rat   389 PELIRAIISKMNMKELVVVYGTTENSPVTFMNFPEDTLEQKAGSVGRIMPHTEAQIVNMETGELT 453

  Fly   437 GVGPRTTGELCVRGPQVMAGYLNNDEANQVTFYPGNWLRSGDVAFYDEDGLFYITDRMKELIKVK 501
            .:  ...||||:||..||.||....:....|.....|.|:||:|..||.|...|..|.|::|...
  Rat   454 KL--NMPGELCIRGYCVMQGYWGEPQKTFETVGQDRWYRTGDIASMDEQGFCRIVGRSKDMIIRG 516

  Fly   502 GFQVPPAELEAVLRDHPKILEAAVFGIPHEFNGEAPRAIVVLRQGEKASAEEISAYVAERVAHYK 566
            |..:.|||||.....||::.||.|.|:..:..||...|.:.|:.||..:.|||.|:...:::|: 
  Rat   517 GENIYPAELEDFFHKHPQVQEAQVVGVKDDRMGEEICACIRLKSGETTTEEEIKAFCKGKISHF- 580

  Fly   567 KLEGGVIFVDEVPKNPTGKILRRELKEK 594
            |:...::||:..|...:|||.:.:|:|:
  Rat   581 KIPRYIVFVEGYPLTVSGKIQKFKLREQ 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 150/548 (27%)
Firefly_Luc_like 99..587 CDD:213279 144/526 (27%)
Acsf2NP_001030123.1 PRK08315 57..615 CDD:236236 150/548 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100107
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X154
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.710

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