DRSC/TRiP Functional Genomics Resources

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Protein Alignment pdgy and dip2cb

DIOPT Version :9

Sequence 1:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster
Sequence 2:XP_005171457.1 Gene:dip2cb / 569986 ZFINID:ZDB-GENE-070912-589 Length:1595 Species:Danio rerio


Alignment Length:606 Identity:128/606 - (21%)
Similarity:220/606 - (36%) Gaps:170/606 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 TFAQMRDASAAFAVRLQTKFNLQKPDVLAICLPNLPEYPIATLGAIEAGLTVTTVNPVYTPDEIA 168
            |..|:...:...|..|..:..|:..|.:|:..|...:...|..|.:.||....||.|.: |..|:
Zfish  1032 TCLQLHKRAEKIATLLYERGQLRDGDHVALVYPPGLDLIAAFYGCLYAGCIPITVRPPH-PQNIS 1095

  Fly   169 RQLTFSGAKFLVGTVSGFATLSQASKLVGRQIPIAVVRTSAEEALPEGAIDFS---ELTSTQNVR 230
            ..|.         ||.....:|::..::..|: |:.:..|.:.::   |:||.   .:..|    
Zfish  1096 TTLP---------TVKMILEVSRSVCVMTSQM-ISKLLKSRDASV---AVDFKLWPPILET---- 1143

  Fly   231 YEDL---KAP---KEASADDMVFLPFSSGTTGLPKGVMLSHNNITSNCEQVQASLPLDLMGPQNT 289
             :||   :.|   |....|.:.:|.||..|||:..||.:|||..::.|..|:  |..:|...:..
Zfish  1144 -DDLPKRRCPLMFKPCDPDSLAYLDFSVSTTGMLAGVKMSHNATSALCRSVK--LQCELYPSREV 1205

  Fly   290 LPGVLPFFHIYGLTVVMLSKLGQGCRLATMPCFKPDDFMRSLDKYQGSILNLVPPIALFMINHPK 354
            ...:.|:   .||..|:      .|..:.               |.|....|:.|:.|.:  :|.
Zfish  1206 AVCLDPY---CGLGFVL------WCLCSV---------------YAGQQSVLISPMDLEV--NPA 1244

  Fly   355 LTQETAPHLKVVMSGAAPIGQHDVERFLNKFPNTVFKQGYGMT---------EASPVVLLTPEGN 410
            |..:.....||..:..:........|.|:...:|:..:|..:|         |..|.|.||....
Zfish  1245 LWLQAVSQFKVRDTFCSYSVMELCTRSLSSLTDTLKARGMDLTRVRSCVVVAEERPRVALTQSFC 1309

  Fly   411 KVYASTGV--------------------------------------------------------- 418
            |::...|:                                                         
Zfish  1310 KLFKDVGLHPRAVSTAFGCRVNLAICLQPHRLGKLAEQGTSGPDPTTVYVDMRALRHDRVRLVER 1374

  Fly   419 -----LPASTEAKIVP-----LDGSDAKG-VGPRTTGELCVRGPQVMAGY--------LNNDE-A 463
                 ||.....||:|     :...:.|| :|....||:.|..||..:||        :.:|. .
Zfish  1375 GSPHSLPLMESGKILPGVRIIIANPETKGPIGDSHLGEIWVHSPQNASGYFTVFGEENVRSDHFG 1439

  Fly   464 NQVTFYPGN----WLRSGDVAFY------DEDG----LFYITDRMKELIKVKGFQVPPAELE-AV 513
            .:::|  |:    |.|:|.:.|.      |..|    ..|:...:.|:::::|.:..|.::| ::
Zfish  1440 ARLSF--GDTQTVWARTGYLGFLRRTDLTDASGERHDALYVVGALDEVMELRGMKYHPIDIETSI 1502

  Fly   514 LRDHPKILEAAVFGIPHEFNGEAPRAIVVLRQGEKASAEEISAYVAERV--AHYKKLEGGVIFVD 576
            :|.|..|.|.|||...:..      .:||..:|.:..|.::...|...|  .|| .:.|.|:.||
Zfish  1503 IRAHRNITECAVFTWTNLL------VVVVELEGSEQEALDLVPMVTNVVLEEHY-LIVGVVVVVD 1560

  Fly   577 E--VPKNPTGKILRRELKEKF 595
            .  :|.|..|:..|..|::.|
Zfish  1561 TGVIPINSRGEKQRMHLRDGF 1581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 127/604 (21%)
Firefly_Luc_like 99..587 CDD:213279 125/596 (21%)
dip2cbXP_005171457.1 DMAP_binding 6..114 CDD:283995
CaiC 349..940 CDD:223395
AFD_class_I 375..937 CDD:302604
AMP-binding 1005..1489 CDD:278902 100/505 (20%)
AFD_class_I 1022..1584 CDD:302604 128/606 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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