DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pdgy and dip2bb

DIOPT Version :9

Sequence 1:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster
Sequence 2:XP_009300851.1 Gene:dip2bb / 568954 ZFINID:ZDB-GENE-100729-4 Length:1615 Species:Danio rerio


Alignment Length:632 Identity:126/632 - (19%)
Similarity:226/632 - (35%) Gaps:170/632 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 LHEYVWRDFKKWERRT--------------AAVCVITDRQYTFAQMRDASAAFAVRLQTKFNLQK 127
            :|::: .:..:|..:|              .|||..     |..|:...:...|..|..:..:..
Zfish  1027 MHQFL-TEALQWRAQTDPDHTLYVLLNAKGVAVCTA-----TCVQLHKRAEKIAAALMERSGINI 1085

  Fly   128 PDVLAICLPNLPEYPIATLGAIEAGLTVTTVNPVYTPDEIARQLTFSGAKFLVGTVSGFATLSQA 192
            .:.:.:..|...:...|..|.:.||....||.|.: |..::..|.         ||.....:|:|
Zfish  1086 GENVVLLYPPGIDLIAAFYGCLYAGCIPVTVRPPH-PQNLSATLP---------TVRMIIDVSKA 1140

  Fly   193 SKLVGRQIPIAVVRTSAEEALPEGAIDFSELTSTQNVR-------YEDL--KAP----KEASADD 244
            :.::..|:...::|:             .|..:|.|::       .:||  |.|    |..:|:.
Zfish  1141 ACILTTQVLTKILRS-------------KEAAATVNIKTWPIIIDTDDLPRKRPPTIYKPPNAEM 1192

  Fly   245 MVFLPFSSGTTGLPKGVMLSHNNITSNCEQV----------QASLPLD---------------LM 284
            :.:|.||..|||:..||.:||..:::.|..:          |.::.||               ..
Zfish  1193 IAYLDFSVSTTGMLTGVKISHAAVSALCRSIKLQCELYSSRQIAICLDPYCGLGFVLWCLASVYS 1257

  Fly   285 GPQNTLPGVLPFFHIYGLTVVMLSKLGQ------GCRLATMP-CFKPDDFMRSLDKYQGSILNLV 342
            |.|:.|   :|...:.....:.|..|.|      .|..:.|. |.|.......|.|.:|..|:.|
Zfish  1258 GHQSIL---IPPMELETSLTLWLGTLSQYRIRDTFCSYSVMELCTKGLGGQTELLKARGVNLSCV 1319

  Fly   343 PPIALFMINHPKL------------------TQETA----PHLKVVMSGAAPIGQHDVERFLNKF 385
            ....:.....|:|                  ...||    .:|.:.:.|..           ...
Zfish  1320 RSCVVIAEERPRLALTHSFSKLFKDIGLSMRAVSTAFGSRVNLAICLQGTT-----------GPD 1373

  Fly   386 PNTVFKQGYGMTEASPVVLL---TPEGNKVYASTGVLPASTEAKIVPLDGSDAKGVGPRTTGELC 447
            |:||:.....:.. ..|.|:   .|:...:..|..:||.   .::|.::......:|....||:.
Zfish  1374 PSTVYVDMKSLRH-DRVRLVERGAPQSLPLMESGTILPG---VRVVIVNPETRGPLGDSHLGEIW 1434

  Fly   448 VRGPQVMAGY--------LNNDEAN-QVTFYPGN----WLRSGDVAFY----------DEDGLFY 489
            |..|....||        |..|..| :::|  |:    |.|:|.:.|.          |.....:
Zfish  1435 VNSPHNATGYYTIYGEENLQADHFNTKLSF--GDPQTLWARTGYLGFVKRTELTDASGDRHDALF 1497

  Fly   490 ITDRMKELIKVKGFQVPPAELE-AVLRDHPKILEAAVFGIPHEFNGEAPRAIVVLRQ--GEKASA 551
            :...:.|.::::|.:..|.::| :|.|.|..|.|:|||        .....:||:.:  |.:..|
Zfish  1498 VVGYLDETLELRGLRYHPIDIETSVSRAHRSIGESAVF--------TWTNLLVVVAELCGSEQDA 1554

  Fly   552 EEISAYVAERV-AHYKKLEGGVIFVDE--VPKNPTGKILRRELKEKF 595
            .::...|...| ..:..:.|.|:.||.  :|.|..|:..|..|::.|
Zfish  1555 LDLVPLVTNVVLEEHHLIVGVVVIVDPGVIPINSRGEKQRMHLRDSF 1601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 125/630 (20%)
Firefly_Luc_like 99..587 CDD:213279 117/586 (20%)
dip2bbXP_009300851.1 DMAP_binding 9..137 CDD:283995
Dip2 391..955 CDD:213273
AFD_class_I 1052..1604 CDD:327384 123/606 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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