DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pdgy and slc27a4

DIOPT Version :9

Sequence 1:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_001017737.1 Gene:slc27a4 / 550432 ZFINID:ZDB-GENE-050417-248 Length:643 Species:Danio rerio


Alignment Length:562 Identity:137/562 - (24%)
Similarity:226/562 - (40%) Gaps:93/562 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 RDFKKWERRTAAVCVITDRQYTFAQMRDASAAFA-VRLQTKFNLQKPDVLAICLPNLPEYPIATL 146
            :..||:..:||.:...||.:::|.::.:.|...| ..||..|  ::.||:|:.:.|..:|....|
Zfish    82 KSVKKYGNKTALIFEGTDEKWSFKELDEYSNRVANFLLQQGF--REGDVVALFMENRHQYVGLWL 144

  Fly   147 GAIEAGLTVTTVNPVYTPDEIARQLTFSGAKFLVGTVSGFATLSQASKLVGRQIPIAVVRTSAEE 211
            |..:.|:....:|.....:.:...:..|.||.:|........:.:....:|:.:.:.|......:
Zfish   145 GMAKIGVEAALINFNLRLEALVHCVNISSAKAVVFGSELTEAMCEVHSSMGKTVKLFVSGEWDPK 209

  Fly   212 ALPEGA--ID-FSELTSTQNVRYEDLKAPKEASADDMVFLPFSSGTTGLPKGVMLSHNNITSNCE 273
            .:|.|.  :| ..|.|||...:..|      .|..|.:|..::|||||:||..::.|:.......
Zfish   210 RVPVGTEHLDPLLETTSTIQPKQPD------RSFTDRLFYIYTSGTTGMPKAAIVVHSRYYRMAA 268

  Fly   274 QVQASLPLDLMGPQNTLPGVLPFFH------------IYGLTVVMLSKLGQGCRLATMPCFKPDD 326
            .|....   .|.|::.|...||.:|            |:|:|||:..|            |....
Zfish   269 LVYYGF---RMKPEDVLYDCLPLYHSAGNIVGIGQGLIHGMTVVIRKK------------FSASK 318

  Fly   327 FMRSLDKYQGSILNLVPPIALFMINHPKLTQETAPHLKVVMSGAAPIGQHDVERFLNKFPNTVFK 391
            |.....||..:|:..:..|..:::|.|:  ::|....||.|:....:.|...|.|.|:|......
Zfish   319 FWDDCIKYNCTIVQYIGEICRYLLNQPR--KDTERKHKVRMALGNGLRQSIWEEFTNRFNVPQIA 381

  Fly   392 QGYGMTEASPVVLLTPEGNKVYA---STGVLPASTEAKIVPLD--------GSDAKGV----GPR 441
            :.||.||.:  ..|....||..|   ::.:||.....::|.:|        |.|  ||    ||.
Zfish   382 EFYGATECN--CSLGNFDNKTGACGFNSRILPYVYPIRLVKVDEETMELIRGPD--GVCIPCGPG 442

  Fly   442 TTGELCVRGPQ-----VMAGYLNNDEAN----QVTFYPGN--WLRSGDVAFYDEDGLFYITDRMK 495
            ..|:|..|..|     ...||:|....|    |..|..|:  :| ||||...|:.|..|..||..
Zfish   443 EPGQLVGRIIQNDPLRRFDGYVNQTATNKKIAQDVFKKGDSAYL-SGDVLVMDDFGYMYFRDRTG 506

  Fly   496 ELIKVKGFQVPPAELEAVLRDHPKILEAAVFGIPHEFNGEAPRAIVVLRQGEKASAEEISAYVAE 560
            :..:.||..|...|:|..|.....:.:..|:|:      |.|.|     :|:...|.........
Zfish   507 DTFRWKGENVSTTEVEGTLSRLLDMKDVVVYGV------EVPGA-----EGKAGMAAIADPENNT 560

  Fly   561 RVAHYKK-LEGG---------VIFVDEVPKNPTGKILRRELK 592
            .:|.:.: ||..         :.|:.||.|..|.|..:.:::
Zfish   561 DLAKFSRDLEKALPPYARPVFLRFLPEVDKTGTFKFQKTDMR 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 137/562 (24%)
Firefly_Luc_like 99..587 CDD:213279 133/539 (25%)
slc27a4NP_001017737.1 PRK08279 73..643 CDD:236217 137/562 (24%)
hsFATP4_like 99..608 CDD:213305 132/545 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582966
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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