DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pdgy and slc27a2a

DIOPT Version :9

Sequence 1:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_001020470.1 Gene:slc27a2a / 449925 ZFINID:ZDB-GENE-050706-104 Length:614 Species:Danio rerio


Alignment Length:521 Identity:114/521 - (21%)
Similarity:186/521 - (35%) Gaps:97/521 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 VITDRQYTFAQMRDASAAFAVRLQTKFNLQKPDVLAICLPNLPEYPIATLGAIEAGLTVTTVNPV 161
            |..|.:||:   |||. ..:.||......:...::|:...|.|.|....|...:.|.||..:|..
Zfish    71 VFGDERYTY---RDAD-RISNRLANALRDRSGQIVALFHGNAPMYVFTWLALAKLGCTVALLNTN 131

  Fly   162 YTPDEIARQLTFSGAKFLVGTVSGFATLSQASKLVG---------RQIPIAVVRTSAEEALPEGA 217
            .....:......||||          ||..|::||.         ||..::|:..|. ||...|.
Zfish   132 IRSRSLVHCCECSGAK----------TLITAAELVPAVLEVLPSLRQQQVSVLMLSG-EAETHGI 185

  Fly   218 IDFSELTSTQNVRYEDLKAPKEASADDMVFLPFSSGTTGLPKGVMLSHNNITSNCEQVQASLPLD 282
            |:.:...|..:.....:...:..:........::||||||||..:::|..:.             
Zfish   186 INLTNQVSCASEEAPPISLRQHITMKSPALYIYTSGTTGLPKAAVVTHEKVW------------- 237

  Fly   283 LMGPQNTLPGV---------LPFFHIYGLTVVMLSKLGQGCRLATMPCFKPDDFMRSLDKYQGSI 338
            :|.....|.||         ||.:|..|....:...:.:|..:.....|....|.....::..::
Zfish   238 MMSFLQRLSGVCSSDIIYICLPLYHSAGFLAGLSGAIERGITVVLKSKFSASRFWDDCREHNVTV 302

  Fly   339 LNLVPPIALFMINHPKLTQETAPHLKVVMSGAAPIGQHDVERFLNKFPNTVFKQGYGMTE----- 398
            :..:..:..::.|.|:...:....:::.:...  |.......||.:|.:....:.||.||     
Zfish   303 IQYIGEVMRYLCNTPERENDRQHSVRLALGNG--IRAETWREFLRRFGDVRVCECYGATEGNIGF 365

  Fly   399 ------------ASPV-VLLTPEGNKVYASTGVLPASTEAKIVPLDGSDAKGV--GPRTTGELCV 448
                        .|.: .||.|     ||.....|...|    |:.|||...|  .|..||.|..
Zfish   366 FNYTGKIGSIGRVSAIHKLLFP-----YAFLKFDPEKEE----PVRGSDGLCVEAAPGETGLLVA 421

  Fly   449 RGPQV--MAGYLNNDEANQV-----TFYPGN-WLRSGDVAFYDEDGLFYITDRMKELIKVKGFQV 505
            :..::  ..||..|....:.     .|..|: :..:||:...|..|..:..||:.:..:.||..|
Zfish   422 KIHKLAPFEGYAKNSTQTEKKRLRDVFQRGDMYFNTGDLILADRQGFLFFQDRIGDTFRWKGENV 486

  Fly   506 PPAELEAVLRDHPKILEAAVFGIP---HEFNGEAPRAIVVLRQGEKASAEEISAYVAERVAHYKK 567
            ...|:..:|.....|..|.|:|:.   ||  |....|.:.|..|.:....  :||     .|.|.
Zfish   487 ATTEVSEILLMLDFIEAANVYGVTVPGHE--GRVGMAALQLTDGMEFDGS--AAY-----EHMKN 542

  Fly   568 L 568
            |
Zfish   543 L 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 114/521 (22%)
Firefly_Luc_like 99..587 CDD:213279 113/519 (22%)
slc27a2aNP_001020470.1 PRK08279 20..614 CDD:236217 114/521 (22%)
AFD_class_I 74..604 CDD:302604 113/518 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582964
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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