DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pdgy and acsl1b

DIOPT Version :9

Sequence 1:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_001003569.1 Gene:acsl1b / 445175 ZFINID:ZDB-GENE-040801-88 Length:697 Species:Danio rerio


Alignment Length:570 Identity:129/570 - (22%)
Similarity:223/570 - (39%) Gaps:140/570 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 LAICLPNLPEYPIATLGAIEAGLTVTTVN-PVYTPDEIARQ-LTFSGAKFLVGTVSGFATLSQAS 193
            :.|...|.||:.||.|    |..|.:.:: |:|  |.:..: :::...|..:.||  ...:.:.:
Zfish   150 IGIFSQNRPEWTIAEL----ACYTYSLISVPLY--DTLGTEAISYILDKTCISTV--VCDVPEKA 206

  Fly   194 KLV-----GRQ------IPIAVVRTSAEEALPEGAIDFSELTSTQNVRYEDLKAPKEASADDMVF 247
            .|:     |||      |.:|.|....:....:..|....||..:|:.....:.|:....||:..
Zfish   207 GLLLECVSGRQHSVKTLILMADVDADLQSRAQQCGIQIISLTDAENMGKTHRRQPEPPQPDDLAV 271

  Fly   248 LPFSSGTTGLPKGVMLSHNNITSNCEQ----VQASLPLDLMGPQNTLPGVLPFFHIY-----GLT 303
            :.|:|||||.|||.||:|.||.||...    ..::.||   ..:::....||..|::     |:.
Zfish   272 ICFTSGTTGNPKGAMLTHRNIVSNISAFIHVTNSTCPL---SSRDSHISYLPLAHMFERVVQGVV 333

  Fly   304 VVMLSKLG--QG---CRLATMPCFKPDDF-------MRSLDKYQGSILNLVPPIALFMIN----- 351
            ::..:::|  ||   ..:..:...||..|       .|..||..|....   |:...::.     
Zfish   334 LLHGARIGYFQGDIRVLMDDLIALKPTIFPVVPRLLNRMFDKIYGQANT---PLKRRLLEFAFRR 395

  Fly   352 --------------------HPKLTQETAPHLKVVMSGAAPIGQHDVERFLNKFPNTVFKQGYGM 396
                                ..|:.......::::::|||||.: .|..||.......|.:|||.
Zfish   396 KEAEMKSGIMRRDSIWDKIIFKKVQASVGGCVRMMVTGAAPISE-PVLTFLRAALGCQFYEGYGQ 459

  Fly   397 TEASPVVLLTPEGNKVYASTGVLPASTEAKIV--PLDGSDAKGV--------GPRTTGELCVRGP 451
            ||.:.            .||..||....|..|  ||..:|.|.|        .....||:|||||
Zfish   460 TECTA------------GSTTTLPGDWTAGHVGAPLPCNDIKLVDVAEMNYYAANGEGEVCVRGP 512

  Fly   452 QVMAGYLNNDEANQVTFYPGNWLRSGDVAFYDEDGLFYITDRMKELIKV-KGFQVPPAELEAVLR 515
            ....|||.:.|..:.......|:.:||:..:..:|...|.||.|.:.|: :|..:.|.::|.:..
Zfish   513 NAFKGYLKDPEKTKEALDEEGWVHTGDIGRWLPNGSLKIVDRKKHIFKLAQGEYIAPEKIENIYI 577

  Fly   516 DHPKILEAAVFG-----------IPH-EF-------------------NGEAPRAIV--VLRQGE 547
            ....:::|.|.|           :|. :|                   |.:..:||:  :::.|:
Zfish   578 RSEAVVQAFVHGDSLQACLVAIIVPDPDFLPGWAKKRGIEGTYEDLCKNKDIKKAILEDIIKLGK 642

  Fly   548 KASAEEISAYVAERVAHYK--KLEGGVIFVDEVPKNPTGKILRRELKEKF 595
            ::..:... .|.:...|.:  .::.|::       .||.|..|.:|:..|
Zfish   643 ESGLKSFE-QVKDIALHSEMFTIQNGLL-------TPTLKAKRADLRNHF 684

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 128/568 (23%)
Firefly_Luc_like 99..587 CDD:213279 126/560 (23%)
acsl1bNP_001003569.1 PLN02736 88..695 CDD:178337 129/570 (23%)
LC-FACS_euk 116..692 CDD:213293 129/570 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582961
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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