DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pdgy and bgm

DIOPT Version :10

Sequence 1:NP_572988.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_524698.1 Gene:bgm / 44117 FlyBaseID:FBgn0027348 Length:666 Species:Drosophila melanogaster


Alignment Length:681 Identity:152/681 - (22%)
Similarity:264/681 - (38%) Gaps:166/681 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 RMRSATAFGSAATRSITTNRRQRTTSTASAQRERTQSVSETDKFLHYSPEDGYYKTSPFDPVTIP 73
            |:|.|.|:              |||:...|.:.|             ..:||   ....:|:::|
  Fly    15 RLRQADAY--------------RTTNRQDAVKIR-------------MAKDG---IGAEEPISVP 49

  Fly    74 NVPLHEYV--WRDFKKWERRTA--AVCVITDRQYTFAQMRDASAAFAVRLQTKFNLQKPDVLAIC 134
            .: |...|  :.|:.....:..  ....:|.:||. .::...:.||     .|..|::...:.:.
  Fly    50 GL-LKRTVNNYGDYPALRTKNGKNGYHTVTYKQYE-QKVHQVAKAF-----IKLGLEEHHSVGVL 107

  Fly   135 LPNLPEYPIATLGAIEAGLTVTTVNPVYTPDEIARQLTFSGAKFLVGTVSGFATLSQASKLVGRQ 199
            ..|..|:..:.:|||.|...:..:....:.|.:...|..|.|:.:|     .....|..|:...:
  Fly   108 AFNCAEWFYSAMGAIHARGIIAGIYTTNSADAVQHVLESSHAQIVV-----VDDAKQMDKIHAIR 167

  Fly   200 IPIAVVRTSAEEALP--------EGAIDFSELTSTQNVRYED--LKAPKEASADDMVFLPFSSGT 254
            ..:..::.:.:...|        :|...:||:.|......||  :...:..:.::...|.::|||
  Fly   168 DKLPKLKAAIQIQEPYSPYLKKEDGYYRWSEIESMNVSDVEDQYMTRLENVAINECCCLVYTSGT 232

  Fly   255 TGLPKGVMLSHNNITSNCEQVQASLPLDLMGPQNTLPGVLPFFHIYGLTV-VMLSKLGQGC---- 314
            .|:||||||||:|||.:...:..::...::|.: ::...||..|:...|| :.......||    
  Fly   233 VGMPKGVMLSHDNITFDVRGIVKAMDRVVVGAE-SIVSYLPLSHVAAQTVDIYTCAFVAGCIWFA 296

  Fly   315 --------RLATMPCFKPDDFM---RSLDKYQ----------GSILNLVPPIALFMINHPKLTQE 358
                    .:.::...:|..||   |..:|:|          ||:..::...|..:         
  Fly   297 DKDALKGTLVKSLQDARPTRFMGVPRVYEKFQERMVAVASSSGSLKKMLASWAKGI--------- 352

  Fly   359 TAPHLKVVMSGAAPIGQHDVERFLNKFPNTVF----KQGYG----MTEASPVVLLTPEGNKVYAS 415
            |..|. :|..|.:..|      |..|...::.    ||..|    :|.||....::||..|.:.|
  Fly   353 TLKHY-MVSQGKSSGG------FRYKIAKSLIMSKVKQALGFDRVLTLASAAAPMSPETKKYFLS 410

  Fly   416 ------------------TGVLPAS----TEAKIVPLDGSDAKGVGPRTT--GELCVRGPQVMAG 456
                              |..||.|    |..|.:|  |.::|.:.....  ||||:||..|..|
  Fly   411 LDLKIVDAFGMSETAGCHTICLPDSVGLNTIGKTLP--GCESKFINKDANGHGELCIRGRHVFMG 473

  Fly   457 YLNNDEANQVTFYPGNWLRSGDVAFYDEDGLFYITDRMKELIKVKGFQ-VPPAELEAVLRDHPKI 520
            |::|.|..:.:.....||.|||:.|.|:.|...:|.|.||:|...|.: :||..:|..::   |.
  Fly   474 YIDNKEKTEESLDDDCWLHSGDLGFVDDKGYVSLTGRSKEIIITAGGENIPPVHIENTIK---KE 535

  Fly   521 LEAAVFGIPHEF-NGEAPRAIVVL----RQGEKASAE-------EISAYVAERVAHYKKLEGGVI 573
            |:|    |.:.| .||..:.:.||    .:.:|.|.|       |.|.:|......:|.:.    
  Fly   536 LDA----ISNAFLVGEQRKYLTVLITLKTEVDKDSGEPLDELSHESSVWVKSLGVEHKTVS---- 592

  Fly   574 FVDEVPKNPTGKI-------LRRELKEKFSD 597
              |.:...|..|:       ::|..|:..|:
  Fly   593 --DILAAGPCPKVWKSIEDAIKRANKQSISN 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdgyNP_572988.1 Firefly_Luc_like 93..587 CDD:341237 133/583 (23%)
bgmNP_524698.1 ACSBG_like 69..665 CDD:341256 136/596 (23%)

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